Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 >seq5 Length=869209 Score = 168 bits (186), Expect = 7e-37 Identities = 282/404 (70%), Gaps = 8/404 (2%) Strand=Plus/Minus Query 141467 GCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAACACAAT 141526 |||||| |||| || | | ||||| ||||| ||||| ||| || |||| || | Sbjct 711151 GCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAG 711092 Query 141527 CAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAACCTTTACGAAT 141586 || ||||||||| || ||||||| ||| |||||| || || | ||| ||| | Sbjct 711091 CAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCAC 711032 Query 141587 ACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAAGGTACTAC-GC 141645 ||| ||||| || |||| | || || | | || ||||| | || || | ||| || Sbjct 711031 ACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGA-TACAGC 710973 Query 141646 CAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAATCATGCCTGCGT 141705 |||| || | ||||||| | ||| |||| ||| ||||| |||||||| Sbjct 710972 CAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGT 710913 Query 141706 TAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCA---GAGTTTGCATCAT 141762 |||| || |||||||| |||| || || || || ||||| ||| ||| | |||| Sbjct 710912 TAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCAT--- 710856 Query 141763 TGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAATTGACGAGTTG 141822 |||| || || |||||||||||| | ||||| | ||| || || ||||| ||||| |||| Sbjct 710855 TGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTG 710796 Query 141823 GGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTA 141866 ||||||| || || | |||||| || || |||| || || ||| Sbjct 710795 GGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCTTA 710752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 80032 ATTTGGCTCCCCAGACACGGATCGAACGTGTGACCCACAGATTAACAGTCTGCTGCTCT- 80090 |||||||||||||||| | |||||| |||||| || ||||||||||| || ||||| Sbjct 553455 ATTTGGCTCCCCAGACTGGACTCGAACCAGTGACCTACGGATTAACAGTCCGCCGCTCTA 553514 Query 80091 ACCAACTGAGCTACTGAGGAA 80111 ||||||||||||||| |||| Sbjct 553515 ACCAACTGAGCTACTAGGGAA 553535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523786869739680