Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 >seq5 Length=869209 Score = 154 bits (170), Expect = 2e-32 Identities = 312/462 (68%), Gaps = 6/462 (1%) Strand=Plus/Minus Query 137852 GAACAGAGTGATGTAGTCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAAC 137911 ||||| ||||| ||||| ||||||||||| || | | |||||||| ||| | || || Sbjct 711211 GAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAACTGCAC 711152 Query 137912 ACCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAG 137971 ||||| |||| || | | ||||| || ||||| || ||| || || ||||| || Sbjct 711151 GCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAG 711092 Query 137972 GAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCACGGAC 138031 || || ||||| || ||||| | || ||| ||| || || || |||||||| || Sbjct 711091 CAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCAC 711032 Query 138032 TCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCC 138091 |||||||| || || || ||||| || |||| || || | || || ||| || Sbjct 711031 ACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCC 710972 Query 138092 AGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTT 138151 |||||| | |||| || | |||| |||| || ||||| |||||||| Sbjct 710971 AGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTT 710912 Query 138152 AATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCTGATTTG---TT 138208 ||| || ||||| || || | || | ||| | |||||| | || || || || Sbjct 710911 AATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGG---CACTGGAGGTGGCATT 710855 Query 138209 AATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAGG 138268 || || | ||| |||||| ||||| | ||||| || ||||| ||||| || || Sbjct 710854 GATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGG 710795 Query 138269 AGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTT 138310 ||||| | || | ||| || || || ||||| ||||| || Sbjct 710794 GGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCTT 710753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528406837680000