Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq57698 125 9e-24 seq1973 116 5e-21 seq68 107 2e-18 seq51 89.7 6e-13 >seq57698 Length=6283 Score = 125 bits (138), Expect = 9e-24 Identities = 260/380 (68%), Gaps = 28/380 (7%) Strand=Plus/Minus Query 15884 ACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGC 15943 ||| ||||| |||||||| ||||| | || | |||||| | ||| ||||| || || || Sbjct 5068 ACGGTCAAAACGACCTGGACGAAGTAATGCTTTATCAAGAACATCTACGCGGTTAGTCGC 5009 Query 15944 GGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGC---TG 16000 || || || | || ||| | | ||||||||||||||||| | |||| || Sbjct 5008 AGCAATAACGATAACGCCTTCATTGCCTTCAAAACCATCCATCTC---AACAAGCATTTG 4952 Query 16001 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCA-CTG-----CGTTG 16054 ||| | ||||| || || ||||||| | |||||||| | ||| || || Sbjct 4951 GTTTAAGGTTTGCTCACGCTCATCAT------GACCACCACCAGTACCTGAACCACGATG 4898 Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG---TTGA-TTTTCGCGAG 16110 || || ||||||||||||||||| |||| ||| || || ||| |||||| | Sbjct 4897 ACGACCAACAGCATCAATCTCATCAATAAAGATGATACAAGGCGCATGACGTTTCGCTTG 4838 Query 16111 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 16170 |||||| | ||| || |||||| || || |||||||| ||||| || ||||||| Sbjct 4837 ----TTCAAACATATCACGAACACGCGATGCACCTACACCAACGAACATTTCGACAAAGT 4782 Query 16171 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 16229 | | || | | | || ||| || || |||| |||||| ||||| ||| || | Sbjct 4781 CAGAACCAGAGATACT-GAAGAAAGGTACTTTAGCTTCACCAGCAATTGCTTTTGCTAAT 4723 Query 16230 AGAGTCTTACCCGTACCTGG 16249 | || ||||| |||||||| Sbjct 4722 AATGTTTTACCTGTACCTGG 4703 >seq1973 Length=162522 Score = 116 bits (128), Expect = 5e-21 Identities = 332/505 (66%), Gaps = 18/505 (4%) Strand=Plus/Plus Query 15884 ACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGC 15943 ||| ||||| |||||||| ||||| | || | ||| | | ||| || || || || || Sbjct 27188 ACGGTCAAAACGACCTGGACGAAGTAAAGCTTTATCCAATACATCTACACGGTTTGTGGC 27247 Query 15944 GGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGC---TG 16000 || || || | | |||| | | || ||||| ||||||||| | |||| || Sbjct 27248 AGCAATTACGATCACACCTTCATTGCCTTCGAAACCGTCCATCTCT---ACAAGCATTTG 27304 Query 16001 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACC---ACCAGCACTGCGTTGCTT 16057 ||| | |||||||| |||||||||| | || ||| ||| | || || || Sbjct 27305 GTTCAAGGTTTGTTCACGTTCATCATGACC--GCC-ACCTGTACCTGAACCACGATGACG 27361 Query 16058 TCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTTCGCGAGCGAC 16114 || || |||||||||||||||||||| | ||| |||||| ||| || ||| Sbjct 27362 ACCTACAGCATCAATCTCATCAATGAAAATGATACATGGTGCATGACGTT---TAGCTTG 27418 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 ||| || | ||| || ||||| || || |||||||||||||| || || || | | Sbjct 27419 TTCGAACATATCACGAACACGAGAAGCACCAACACCAACAAACATTTCAACGAAATCAGA 27478 Query 16175 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | ||| | ||| || || |||| |||||| ||||| ||| ||| | | || Sbjct 27479 ACCAGAAATACTAAAGAAAGGAACTTTAGCTTCACCAGCAATTGCTTTGGCTAATAATGT 27538 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCC 16294 |||||||||||||| ||| | | | |||| |||||||| | || ||| | Sbjct 27539 TTTACCCGTACCTGGAGGACCAACCATTAACACACCACGTGGAATAGTTGCACCAAGACG 27598 Query 16295 AAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGC 16354 | || | | || | || | ||||| ||||| || | | ||| | ||| || | Sbjct 27599 TTTGAATTTTGCTGGATCTTTTAAGAAATCGACAATTTCAACGACTTCTTGTTTTGCTTC 27658 Query 16355 GTCAATCCCCTCAACATCGGTAAAC 16379 |||| || ||||||| |||||| Sbjct 27659 GTCACAACCTGCAACATCAGTAAAC 27683 >seq68 Length=444459 Score = 107 bits (118), Expect = 2e-18 Identities = 365/553 (66%), Gaps = 22/553 (4%) Strand=Plus/Plus Query 15822 CGCGCGTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATC 15881 || ||||| || || |||||||||||| ||| | ||| | || |||||| Sbjct 24859 CGGGCGTGCACGGTCAGGATCTTCTCGCGGCCCTTGATGTCGGGGTTCGGCACATGGATC 24918 Query 15882 TTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTT 15941 | || || ||||| || ||||| || ||||| || || | ||| || || || Sbjct 24919 TGGCGGTCGAAGCGGCCGGGGCGCAGCAGCGCCGGGTCCAGCACATCCTTACGGTTGGTC 24978 Query 15942 GCGGCGATGACAACAATACCTGTTTCGTT---ATCAAAACCATCCATCTCTGTCAAAAGC 15998 || |||| || | | ||| ||| || || || || |||||||| || |||| Sbjct 24979 GCCGCGACGATGATCACACC---TTCATTTGCCTCGAACCCGTCCATCTCGACCAGAAGC 25035 Query 15999 TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCACCAGCACTGCGTTGC 16055 ||||| | || ||||| ||||| ||||| ||| | | |||| ||| | | ||| Sbjct 25036 TGGTTCAGTGTCTGTTCGCGTTCGTCATTGCCGCCGCCGATAC--CCA-CGCCGCGCGCA 25092 Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGAC 16114 |||||||| || ||||| || || || |||||||| || ||| ||| | || Sbjct 25093 CGGCCCACGGCGTCGATCTCGTCGATAAACACGATGCAAGGCGCATTCTTCTTG-GCCTG 25151 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 ||| || | || || ||||| || || || ||||| ||||| ||||| |||| | Sbjct 25152 TTCGAACATGTCGCGCACACGGGATGCACCGACCCCAACGAACATTTCCACGAAGTCGGA 25211 Query 16175 GGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233 | | | || | || ||| || || | |||||||| ||||| || ||||| || | Sbjct 25212 ACCCG-AGATGGTGAAGAACGGCACGCCCGCCTCACCCGCGATGGCGCGCGCGAGCAGGG 25270 Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---AC 16290 | |||||||| || || ||| | || || |||||| || |||||| |||| || Sbjct 25271 TTTTACCCGTGCCGGGGGGACCGACCAGCAGCGCACCTTTGGGGATCTTGCCGCCGAGAC 25330 Query 16291 TTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGG 16350 | ||| ||| | |||||| || || || || |||||||||| || || |||| Sbjct 25331 -GCGAAAACTTCT-GCGGGTTGC-GCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGG 25387 Query 16351 CGGCGTCAATCCC 16363 | |||| || || Sbjct 25388 CCTCGTCGATGCC 25400 >seq51 Length=473680 Score = 89.7 bits (98), Expect = 6e-13 Identities = 254/382 (66%), Gaps = 20/382 (5%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 || || ||| || ||||||||||| || | | || |||| | | ||| || || Sbjct 102601 GACCTGACGGTCGAAGCGACCTGGACGTAATAAGGCAGCATCCAATACATCCGGACGGTT 102660 Query 15938 CGTTGCGGCGATGACAACAATACCTGTTTCGTT---ATCAAAACCATCCATCTCTGTCAA 15994 || |||||||| | || |||||| ||| || ||| || || |||||||| || Sbjct 102661 GGTGGCGGCGATAATAATAATACC---TTCATTACCATCGAAGCCGTCCATCTCAACCAG 102717 Query 15995 AAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA--TACCACCAGCACTGCGT 16052 | |||||| | ||||| || || |||||| | || || || ||| || | || Sbjct 102718 CATCTGGTTTAAGGTTTGCTCACGCTCATCA-TGGCCACCACCTA-AACCGGCGCCACGC 102775 Query 16053 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT----TGATTTTCGCG 16108 ||| || ||||| ||||||||||| || |||| ||||| ||| |||| || Sbjct 102776 TGCCGGCCTACGGCGTCAATCTCATCGATAAAGATAATGCAAGGTGCCGCTTTTTTGGCT 102835 Query 16109 AGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 || || || | || || || ||| ||| || ||||| |||||||| || ||||| Sbjct 102836 TGC----TCGAACATGTCGCGCACCCGCGAGGCACCGACACCGACAAACATTTCAACAAA 102891 Query 16169 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227 | || |||| | | | | || || || || | |||||| ||||| || ||| | Sbjct 102892 ATCTGAACCGGAGATAGT-AAAAAACGGTACCTTGGCTTCACCGGCAATCGCCTTGGCTA 102950 Query 16228 GAAGAGTCTTACCCGTACCTGG 16249 | ||| ||||| |||||||| Sbjct 102951 ACAAAGTTTTACCGGTACCTGG 102972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619343898409920