Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq57698 129 7e-25 seq1973 120 4e-22 seq51 96.9 4e-15 seq68 89.7 6e-13 >seq57698 Length=6283 Score = 129 bits (142), Expect = 7e-25 Identities = 261/380 (69%), Gaps = 28/380 (7%) Strand=Plus/Minus Query 9191 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9250 ||| ||||| |||||||||||||| | || | |||||| | ||| ||||| || ||||| Sbjct 5068 ACGGTCAAAACGACCTGGACGAAGTAATGCTTTATCAAGAACATCTACGCGGTTAGTCGC 5009 Query 9251 GGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTG 9307 || || || | || ||| ||||| ||||||||||||||||| | | ||| Sbjct 5008 AGCAATAACGATAACGCCT---TCATTGCCTTCAAAACCATCCATCTCAACAAGCATTTG 4952 Query 9308 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCA-CTG-----CGTTG 9361 ||| | ||||| || || ||||||| | |||||||| | ||| || || Sbjct 4951 GTTTAAGGTTTGCTCACGCTCATCAT------GACCACCACCAGTACCTGAACCACGATG 4898 Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGG---TTGA-TTTTCGCGGG 9417 || || ||||||||||||||||| |||| ||||| || ||| |||||| | Sbjct 4897 ACGACCAACAGCATCAATCTCATCAATAAAGATGATACAAGGCGCATGACGTTTCGCTTG 4838 Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 |||||| | ||| ||||| | || || |||||||| ||||| || ||||||| Sbjct 4837 ----TTCAAACATATCACGAACACGCGATGCACCTACACCAACGAACATTTCGACAAAGT 4782 Query 9478 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536 | | || | | | || ||| || || |||| |||||| ||||| ||| || | Sbjct 4781 CAGAACCAGAGATACT-GAAGAAAGGTACTTTAGCTTCACCAGCAATTGCTTTTGCTAAT 4723 Query 9537 AGAGTCTTACCCGTACCTGG 9556 | || ||||| |||||||| Sbjct 4722 AATGTTTTACCTGTACCTGG 4703 >seq1973 Length=162522 Score = 120 bits (132), Expect = 4e-22 Identities = 334/506 (66%), Gaps = 20/506 (4%) Strand=Plus/Plus Query 9191 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9250 ||| ||||| |||||||||||||| | || | ||| | | ||| || || || || || Sbjct 27188 ACGGTCAAAACGACCTGGACGAAGTAAAGCTTTATCCAATACATCTACACGGTTTGTGGC 27247 Query 9251 GGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTG 9307 || || || | | |||| ||||| || ||||| ||||||||| | | ||| Sbjct 27248 AGCAATTACGATCACACCT---TCATTGCCTTCGAAACCGTCCATCTCTACAAGCATTTG 27304 Query 9308 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACC---ACCAGCACTGCGTTGCTT 9364 ||| | |||||||| |||||||||| | || ||| ||| | || || || Sbjct 27305 GTTCAAGGTTTGTTCACGTTCATCATGACC--GCC-ACCTGTACCTGAACCACGATGACG 27361 Query 9365 TCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT---TGA-TTTTCGCGGGCGA 9420 || || |||||||||||||||||||| | ||||||||| ||| ||| || | Sbjct 27362 ACCTACAGCATCAATCTCATCAATGAAAATGATACATGGTGCATGACGTTTAGCTTG--- 27418 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 ||| || | ||| ||||| | || || |||||||||||||| || || || | | Sbjct 27419 -TTCGAACATATCACGAACACGAGAAGCACCAACACCAACAAACATTTCAACGAAATCAG 27477 Query 9481 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | ||| | ||| || || |||| |||||| ||||| ||| ||| | | | Sbjct 27478 AACCAGAAATACTAAAGAAAGGAACTTTAGCTTCACCAGCAATTGCTTTGGCTAATAATG 27537 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTC 9600 | |||||||||||||| ||| | | | |||| |||||||| | || ||| | Sbjct 27538 TTTTACCCGTACCTGGAGGACCAACCATTAACACACCACGTGGAATAGTTGCACCAAGAC 27597 Query 9601 CAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGG 9660 | || | | || | || | ||||| ||||| || | | ||| | ||| || Sbjct 27598 GTTTGAATTTTGCTGGATCTTTTAAGAAATCGACAATTTCAACGACTTCTTGTTTTGCTT 27657 Query 9661 CGTCAATCCCCTCAACATCGGTAAAC 9686 ||||| || ||||||| |||||| Sbjct 27658 CGTCACAACCTGCAACATCAGTAAAC 27683 >seq51 Length=473680 Score = 96.9 bits (106), Expect = 4e-15 Identities = 255/380 (67%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 9185 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9244 || || ||| || |||||||||||||| | | || |||| | | ||| || || Sbjct 102601 GACCTGACGGTCGAAGCGACCTGGACGTAATAAGGCAGCATCCAATACATCCGGACGGTT 102660 Query 9245 CGTCGCGGCGATGACAACAATACCTGTTTCATT---ATCAAAACCATCCATCTCTGTCAA 9301 || |||||||| | || |||||| |||||| ||| || || |||||||| || Sbjct 102661 GGTGGCGGCGATAATAATAATACC---TTCATTACCATCGAAGCCGTCCATCTCAACCAG 102717 Query 9302 AAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA--TACCACCAGCACTGCGT 9359 | ||||| | ||||| || || |||||| | || || || ||| || | || Sbjct 102718 CATCTGGTTTAAGGTTTGCTCACGCTCATCA-TGGCCACCACCTA-AACCGGCGCCACGC 102775 Query 9360 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT--TGATTTTCGCGGG 9417 ||| || ||||| ||||||||||| || |||| ||| || ||| | |||| || Sbjct 102776 TGCCGGCCTACGGCGTCAATCTCATCGATAAAGATAATGCAAGGTGCCGCTTTT--TTGG 102833 Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 | || || | ||||| |||| ||| || ||||| |||||||| || ||||| | Sbjct 102834 CTTGCTCGAACATGTCGCGCACCCGCGAGGCACCGACACCGACAAACATTTCAACAAAAT 102893 Query 9478 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536 || |||| | | | | || || || || | |||||| ||||| || ||| | Sbjct 102894 CTGAACCGGAGATAGT-AAAAAACGGTACCTTGGCTTCACCGGCAATCGCCTTGGCTAAC 102952 Query 9537 AGAGTCTTACCCGTACCTGG 9556 | ||| ||||| |||||||| Sbjct 102953 AAAGTTTTACCGGTACCTGG 102972 >seq68 Length=444459 Score = 89.7 bits (98), Expect = 6e-13 Identities = 359/552 (65%), Gaps = 20/552 (4%) Strand=Plus/Plus Query 9129 CGCGCGTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATC 9188 || ||||| || || |||||||||||| ||| | ||| | || |||||| Sbjct 24859 CGGGCGTGCACGGTCAGGATCTTCTCGCGGCCCTTGATGTCGGGGTTCGGCACATGGATC 24918 Query 9189 TTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTC 9248 | || || ||||| || || || || ||||| || || | ||| || || ||| Sbjct 24919 TGGCGGTCGAAGCGGCCGGGGCGCAGCAGCGCCGGGTCCAGCACATCCTTACGGTTGGTC 24978 Query 9249 GCGGCGATGACAACAATACCTGTTTCATT---ATCAAAACCATCCATCTCTGTCAAAAGT 9305 || |||| || | | ||| |||||| || || || |||||||| || ||| Sbjct 24979 GCCGCGACGATGATCACACC---TTCATTTGCCTCGAACCCGTCCATCTCGACCAGAAGC 25035 Query 9306 TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCACCAGCACTGCGTTGC 9362 ||||| | || ||||| ||||| ||||| ||| | | |||| ||| | | ||| Sbjct 25036 TGGTTCAGTGTCTGTTCGCGTTCGTCATTGCCGCCGCCGATAC--CCA-CGCCGCGCGCA 25092 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 |||||||| || ||||| || || || || || || || ||| | ||| | Sbjct 25093 CGGCCCACGGCGTCGATCTCGTCGATAAACACGATGCAAGGCGCATTCTTCTTGGCCTGT 25152 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 || || | ||||| || | || || || ||||| ||||| ||||| |||| | Sbjct 25153 TCGAACATGTCGCGCACACGGGATGCACCGACCCCAACGAACATTTCCACGAAGTCGGAA 25212 Query 9483 GCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541 | | | || | || ||| || || | |||||||| ||||| || ||||| || || Sbjct 25213 CCCG-AGATGGTGAAGAACGGCACGCCCGCCTCACCCGCGATGGCGCGCGCGAGCAGGGT 25271 Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACT 9598 |||||||| || || ||| | || || ||||| || |||||| |||| || Sbjct 25272 TTTACCCGTGCCGGGGGGACCGACCAGCAGCGCACCTTTGGGGATCTTGCCGCCGAGAC- 25330 Query 9599 TCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGC 9658 | ||| ||| | |||||| || || || || |||||||||| || || ||||| Sbjct 25331 GCGAAAACTTCT-GCGGGTTGC-GCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGGC 25388 Query 9659 GGCGTCAATCCC 9670 |||| || || Sbjct 25389 CTCGTCGATGCC 25400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588651602756640