Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015208.1 Length=39562 Score E Sequences producing significant alignments: (Bits) Value seq34826 194 4e-45 >seq34826 Length=13225 Score = 194 bits (214), Expect = 4e-45 Identities = 950/1498 (63%), Gaps = 68/1498 (5%) Strand=Plus/Minus Query 32059 GGCAGTCGAGACGTACGCTCGCAACAAGGCCTACGGCATCAGCCACACTCAGGACTTCAA 32118 ||||||||||| |||||| | ||||||| || |||||||||||| | | ||||| Sbjct 5924 GGCAGTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCA- 5866 Query 32119 CCGTAGCCAC-CTCGTGGATGACCAGCTGACAGGCCTCGTGGGCGCTGAGAACAACAACT 32177 | | | | | || || || || || |||| | | | ||| ||||||||| ||| Sbjct 5865 CGGCTGACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACT 5806 Query 32178 TCCTCGAAGGCCGTCACCTGTTCGATAGCGACATGCGCATCACGCTGGGAAGCGGCGATG 32237 |||||||| ||| |||| ||||| ||| ||| ||||| | |||| | Sbjct 5805 ACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGC 5746 Query 32238 AGTTCGCTGTGAATGACCTGCGCTCCTTTGACCTGACCTCCATCACTCCCGGT-TACGAC 32296 |||||||||||||||||| || ||| ||||| | || ||||| |||||| Sbjct 5745 CGTTCGCTGTGAATGACCTCCGAGACTTCAACCTG-CTTCGGGTGGTCCCGCAGTACGAC 5687 Query 32297 CGCCGAGTCAATGGTGACATCGGGATCATGGGTGCCACTGGTCAATCCACTGAGGCCCTG 32356 ||| | ||||| |||||||||| ||||||||| ||| || | ||| | ||||| Sbjct 5686 CGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAGGACACCCGGACCCTG 5627 Query 32357 AAGGACCGCATTACGGCCCTCGGTGTCGGCCATGAGTCCAAGAAGG---AGTACA----- 32408 ||| || | || | ||| | |||| |||| | | || || Sbjct 5626 AAGAAC------ATGGTCAACGGAATGCGCCAAAGGTCCGCCCACGGCGAGGACGCTCGG 5573 Query 32409 -AGGC------CCTGCAAGACGCCGTTAAGATCCTCACCGGTCGCGCTCGTCGTGATCCA 32461 |||| ||| |||||| | ||||| |||||||| |||||||| || ||||| Sbjct 5572 GAGGCTGAATACCTCATGGACGCCCTGAAGATGCTCACCGGACGCGCTCGGCGCGATCCT 5513 Query 32462 GATGGTGCCTTGGCGACCCTCGCACGGTCCCTCACCGACATGAGCTTCTTCGCCAAGAAC 32521 || || ||| ||||||| | || || ||| | | |||||| | || | | |||||| Sbjct 5512 GACGGCACCTGGGCGACCGTAGCGCGATCCTTGAACGACATCGGGTTTGCCACGAAGAAC 5453 Query 32522 GCCTACATGGGCATTCAAGGTATCACGGAGACTGCCGGTCTGGTGACCAAGGGGCACACT 32581 |||||||||||| | || ||||| ||| | || ||| | |||||| ||| Sbjct 5452 GCCTACATGGGCGTACAGAACATCACCGAGGCCGCGTCCCTGATCGTCAAGGGCCACCAG 5393 Query 32582 GCGATGCTCCTGAAGGGCGTTCCGTTCTTCAAGGAGATCATGACCATG---GGCTCGAAG 32638 |||||||||||||||| | ||| | ||||| || | ||| | || | ||| Sbjct 5392 AAGATGCTCCTGAAGGGCATCCCGATGCTCAAGAAG---TGGTCCACGGCAGGGACAAAG 5336 Query 32639 GCGACCCCTGCGTTCCTCTCGGAAATGCACGGTCTGGTGTTCGGTCGCGAGCTGGACAAC 32698 | | | | || ||| |||||||| ||| | ||||| ||||||||| || Sbjct 5335 CTGGAGCTGGACGACATCAAGGAGATGCACGGCCTGATCTTCGGCAAGGAGCTGGACGAC 5276 Query 32699 TTGATCCGGCCTAAGCGTGCTGACATCGTGATGCGACTGCGTGACCAAGCGGATGCCTCG 32758 | || ||||| | || ||||||||| || ||| | | | ||| Sbjct 5275 ATCATTCGGCCCACCCGGCAGGACATCGTGGACAACCTCCGTCGCTCGGAGAATG----- 5221 Query 32759 CCGGTAGTCGCTCAGGCCGTAGGGTCAATCAAGTGGGCAACCGGTGAGCTGGCTGCTCGT 32818 || | | | ||| || |||||| |||||| || || |||||| | || ||||| Sbjct 5220 -GGGCCGCCTCGCAGATCGCAGGGTCCCTCAAGTTCGCCACTGGTGAGATCGCCGCTCGG 5162 Query 32819 TCCCCGTTCACCAAGTTCCTGACCGAATCGTCCAACTACATCGCGGACGCTGGTCGCCAA 32878 ||||||||||| | |||| || || |||||||||| |||||| || |||||| Sbjct 5161 TCCCCGTTCACTTGGCTCCTCCGTGAGTCAGGCAACTACATCATGGACGCGGGCCGCCAA 5102 Query 32879 GGGGCACTTAAGGAGCTGGCCGATGCTGCAT---ACGGCAAGTCCTCCAAGCTGTTCACC 32935 ||||| || || || ||| | | |||||||| |||| ||||||| | Sbjct 5101 GGGGCGCTGGTTGACCTCATCGACCACACCTTGAACGGCAAGGTAACCAACCTGTTCAGC 5042 Query 32936 CCTGAGCGGCTGAAGTCCATGTCCATTACCCCTGAGCAGTTCGAGGGGATGAAGGCCTTG 32995 |||||||| || || || || ||| ||||| |||| |||||| ||| | Sbjct 5041 CCTGAGCGCCTTCGCTCGGCATCGATCACCGACGAGCAATTCGCGGGGATTCAGGGGCTC 4982 Query 32996 AT---GAAG-----GAAGCGACGACTCTGAAGG---ACGGCAAGCTGTCCATTGTTGATC 33044 || | || |||| | ||| |||| ||||||| | ||||| | Sbjct 4981 ATTCGGGAGCACTTCAAGC-AGGAC----AAGGCGACCGGCAAGTGGCGCATTGAGAACG 4927 Query 33045 CAGCCAAGTTCACCAGTGACCCACGCTCCATGGACATCTGGCGCCTCGGTGACAAGATTG 33104 | || ||| | | || | || | |||||| ||| |||||||| || | | Sbjct 4926 CCGCTAAGCTGGCTTCGGATACCCGAGCGATGGACCTCTATCGCCTCGGGGATCGCGTGG 4867 Query 33105 CAGATGAGACCATCCTACGCCCGCACAAGCTGTCGTCTCAGGACACTGAGGCCTACGGTG 33164 | ||||| ||||| || || || |||||| |||| | | | | || ||||| | Sbjct 4866 CTGATGAAACCATGCTGCGTCCACACAAGATGTCCTTCGCGCCCTCCAAGCAGTACGGGG 4807 Query 33165 CTGGCATCAAGATGGCGATGCAGTTCAAGAACTTCACCATCCGCTCCGTGAACGCCCGTG 33224 | ||| |||||| | |||||||||| ||| | | | | | || | ||| Sbjct 4806 CAGGCTGGGCGATGGCCCTTCAGTTCAAGATGTTCGTCCTGAGGAGCCTCAATGGCCGCA 4747 Query 33225 CTGTTCGTGGCTGGCATGACTCGACCAAGAACGGCAGAGCTATCGACCAGACCATGCAGG 33284 | ||| |||||| || || ||||||||| ||| | || ||| |||||||| Sbjct 4746 TGGCTCGGGGCTGGATGGAGAGCACGAAGAACGGCCAAGCGCTTGATCAGGTCATGCAGG 4687 Query 33285 CGATCATCTCGACCGGTATGG---CTG-GCGCTATGTTCGCTGCTCTGGCGTACTCCCGT 33340 | | | | || || ||| ||| | ||||| | || | || | || | Sbjct 4686 CCACCGTGTCCGTGGGCTTGGCCACTGCGTTCTATGCTGCCTCCGCTCACCTAAGGGCTC 4627 Query 33341 TCCGCTGGGATGCCCGAGAAGGACCGCGTTA--AGTACCTGAAGGACGCCCTCAACCCGA 33398 || |||||||| ||| | | ||| | |||||| | | || || ||||| Sbjct 4626 TC----GGGATGCCTGAG--CGTGCTCGTAAGGCGTACCTCGACAAGGCGCTGAACCCTG 4573 Query 33399 ACACCGTGGCCTATGCTGCGTTGTCCCGTGGGTCCCACATCGGTGCCCCTCTGGGCATGG 33458 ||| |||||||||| || | ||| | | || ||| | || || ||| |||||| | Sbjct 4572 ACATGTTGGCCTATGCAGCTATCTCCAGAAGCTCGCACGTAGGAGCGCCTTTGGGCACCG 4513 Query 33459 CGAACTTCATCATGGCACCGCTGGGCTTCGATCAGGCCCGTATGGTCCGCACCTCGAT 33516 | ||||| | |||| ||| |||| ||||||||||| |||||||| || ||||| Sbjct 4512 CTAACTTTCTGCTGGCTCCGTTGGGGTTCGATCAGGCAGCCATGGTCCGTACTTCGAT 4455 Score = 192 bits (212), Expect = 1e-44 Identities = 231/314 (74%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 29885 TATGACGCGCTGATCCGCAAGGCTTCCGATGACTACGGCGTGAACTATGACTACCTGCAC 29944 |||||| | ||||||| | || || | |||||||| || || ||| ||||||| Sbjct 8116 TATGACTCCCTGATCCAGACCGCATCGAACGACTACGGGGTCCCTTACGACCTCCTGCAC 8057 Query 29945 AAGCAGCTTTTCATGGAGTCGCGCTTCAAGAACGACGCCAAGTCCCCGACAGGTCCGCGT 30004 ||||| || |||| ||| || ||||| | ||| | ||| || || || || Sbjct 8056 AAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAAGCCGTGAGCCCTACGGGGCCTCGC 7997 Query 30005 GGTGTCGGCCAGTTCACTCGTGCAACGGGGGCGGCTTACGGGCTGCTTACCGATGCTGAC 30064 ||| |||| |||||||| || || ||| || ||||| ||| | ||||| | ||| Sbjct 7996 GGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTGATCACCGAGGAGGAC 7937 Query 30065 TTCTTCGACCCTGCCAAGTCCATCGACGCAGCCGGTCGTCACATGCGGGACATCCTGAAG 30124 ||||||||||| |||||||||||||||||||||| ||| |||||||| |||| ||| ||| Sbjct 7936 TTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATGCGCGACAACCTCAAG 7877 Query 30125 GCCACCAACGGTGACTACGTTAAGGCTGGCCTGATGTACAACCAAGGCGGTGGACGTCTG 30184 || ||||||| ||| | | ||||| |||||||||||||||||| | ||| | || Sbjct 7876 GCGTCCAACGGCGACGAGCTGAAGGCGCTCCTGATGTACAACCAAGGGGCTGGCCCGGTG 7817 Query 30185 GGCCGCCCGCAGCT 30198 |||||| |||||| Sbjct 7816 GGCCGCAAGCAGCT 7803 Score = 167 bits (184), Expect = 6e-37 Identities = 229/320 (72%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 10772 CAAGAAGCCTGTTCAGCCGCGCCAAGGCGACATGCCGTGGTTCGAGGACGGCAATGGCAA 10831 || |||||| | |||||| ||||||||| |||| | |||| |||| | |||| Sbjct 8663 CAGGAAGCCACTCCAGCCGTATCAAGGCGACCTGCCCTTCATCGACAACGGTGACGGCAC 8604 Query 10832 CGTGGTCTTCAAGTTCAAGTGCTATGCCTCGTACGAGAAAGACGGCGAGAAGCGTGACAT 10891 ||| |||||||||| ||| ||| |||||||| |||||||||| | || Sbjct 8603 GGTGACCTTCAAGTTCGTCGGCTGGGCCAGCTACGAGAAGGACGGCGAGATGATCCCGAT 8544 Query 10892 CAACATCAAGGTGGCTGACAGCCGTGGCAAGAAGATCGAAGTGGTTCCGAACATCTCGGG 10951 | | | || | |||| | |||||| |||| | || |||||||||||||| Sbjct 8543 CCCCCTGCGTGTCGTTGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCGGG 8484 Query 10952 TGGCTCCGAACTGAAGGTCCGCTTCAGCGTCTTCCCGTACAAGTGGAACCCGACTGTTGG 11011 ||||||||| |||||||||||| | || |||| ||| ||||||||||| || || Sbjct 8483 TGGCTCCGAGGGCAAGGTCCGCTTCTCCATCGTCCCCTACGGCTGGAACCCGACCGTGGG 8424 Query 11012 CGCCAGCGTCAAGCTGCAACTGGACGGCGTGATGCTGATCAAGCTGGTCGAGTTCGGTGG 11071 |||| ||| ||||| |||||||| ||| | ||||||| ||| |||||||||| | || Sbjct 8423 CGCCTCCGTGAAGCTCCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGATGA 8364 Query 11072 TGGCGATGATGACTGGGGCG 11091 ||| | || |||||||||| Sbjct 8363 TGGTCAAGACGACTGGGGCG 8344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126206101388768