Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq101083 89.7 5e-13 seq19112 89.7 5e-13 seq5 89.7 5e-13 seq1110 87.8 2e-12 >seq101083 Length=2117 Score = 89.7 bits (98), Expect = 5e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 69734 TTAATCTGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCT 69793 || || ||||||||||| | |||| |||| | ||||||||||||||||||||||||| Sbjct 2034 TTTATATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCT 2093 Query 69794 CT-GCCAATTGAGCTATAGGCCCT 69816 || |||| ||||||||||||||| Sbjct 2094 CTAACCAACTGAGCTATAGGCCCT 2117 >seq19112 Length=29680 Score = 89.7 bits (98), Expect = 5e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 69737 ATCTGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT- 69795 || ||||||||||| | |||| |||| | ||||||||||||||||||||||||||| Sbjct 3360 ATATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTA 3301 Query 69796 GCCAATTGAGCTATAGGCCCT 69816 |||| ||||||||||||||| Sbjct 3300 ACCAACTGAGCTATAGGCCCT 3280 >seq5 Length=869209 Score = 89.7 bits (98), Expect = 5e-13 Identities = 300/459 (65%), Gaps = 6/459 (1%) Strand=Plus/Minus Query 137139 GGGGCTGAACAATGTGATGTAATCGTTGTTTAAATAA-CGTTCAATCATTAAATTGTTCA 137197 |||||||||||| ||||| || || | ||||| | || | | ||| | ||| | Sbjct 711217 GGGGCTGAACAAGGTGATATAGTCATC-TTTAATCAGGCGCTGATACATCAGGCGGTTAA 711159 Query 137198 ACTGAATACCATAGTCCATATGACGGATACGGTTTTCTTCAATGCCTTTGTTGTTCTTGA 137257 |||| | |||||||||| ||| | | ||||| ||||| | || ||| || || | Sbjct 711158 ACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCA 711099 Query 137258 GAACAATCAG-GTTTTCACATTCTAAGTGCCAGCCAGGCCAGTAACATG-TAGCTGAGCC 137315 | || | ||| | || ||| ||| | ||||| || || |||| | | || | || Sbjct 711098 GTACCAGCAGCGATTCCAC-TTCCAGATGCCACAAGGGGTAG-AACAGGGTGGCGGCACC 711041 Query 137316 TTTACGAATACCACCTTGAGAGCATGAATGTACTCCAGTATTAAAATGCTTCCAGAACGG 137375 ||| | ||| ||||| ||||| | |||| | || | |||||||| | ||||| Sbjct 711040 ACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGG 710981 Query 137376 GGTCACGCCAGTATGCTTAACTTCACCAGGCCCAATCTTTGAACCTTCTGCACGGATTGC 137435 | | ||||||||| |||| ||| | || |||| || || || Sbjct 710980 GATACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACG 710921 Query 137436 TCCACCTGAAACCCCAATGCCCGCTCGTTTTGACACGTACGAAATAATAGCAGATGATGT 137495 || | || ||||| || || || | |||||||| | ||| ||| || || Sbjct 710920 GCCTGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGT 710861 Query 137496 TTCATTAATCGAGTCCAAGCTATCACCAGATTCAATCAGTACACAAGAACTAAATTGACG 137555 |||| ||||| |||| ||| |||||| | ||||||||||| || || || || ||||| Sbjct 710860 GGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACG 710801 Query 137556 TGTTGGTGTACGTACTCCGGCCATGATTGGAGTGGGTAG 137594 ||||| ||||| || || | ||| || || || || || Sbjct 710800 GGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAG 710762 >seq1110 Length=205023 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 69740 TGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCTCT-GCC 69798 ||||||||||| | |||| |||| | ||||||||||||||||||||||||||| || Sbjct 34534 TGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAACC 34475 Query 69799 AATTGAGCTATAGGCCCT 69816 || ||||||||||||||| Sbjct 34474 AACTGAGCTATAGGCCCT 34457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510083412656160