Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015264.1 Length=40973 Score E Sequences producing significant alignments: (Bits) Value seq34826 149 2e-31 >seq34826 Length=13225 Score = 149 bits (164), Expect = 2e-31 Identities = 185/251 (74%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 29427 TACGACTTCCTGCACAAGCAGTTGTTCATGGAGTCCCGTTTCAACCCGAACGCCAAGTCT 29486 |||||| ||||||||||||| | |||| ||| ||| |||||||| || ||| | Sbjct 8071 TACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAAGCCGTGAGC 8012 Query 29487 CCTACAGGCCCGCGTGGCATGGCCCAAATGACACGAGCAACCGGTAAGGCTTACGGTCTG 29546 ||||| || || || || || | || | || || || || || || ||||| ||| Sbjct 8011 CCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTG 7952 Query 29547 GAAACCGACGAGGACTTCTTCGACCCTGAAAAGTCCATCGACGCTGCTGCACGTCACCTG 29606 ||||| ||||||||||||||||| | |||||||||||||| || || || ||| || Sbjct 7951 ATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATG 7892 Query 29607 AAGGACAACCTTACGGCGTCCAATGGTGACTACCTCGAAGCTGC-CCTTCTGTACAACCA 29665 |||||||| | ||||||||| || ||| | || |||| || ||| |||||||||| Sbjct 7891 CGCGACAACCTCAAGGCGTCCAACGGCGACGAGCT-GAAGGCGCTCCTGATGTACAACCA 7833 Query 29666 AGGTGGTGGCC 29676 ||| | ||||| Sbjct 7832 AGGGGCTGGCC 7822 Score = 113 bits (124), Expect = 1e-20 Identities = 229/336 (68%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 9802 TCAAGGTGACCTTCCGTTCTTCGAGGACGGCAACGGCAACGTGGTCTTCAAGTTCAAGTG 9861 |||||| ||||| || ||| |||| |||| |||||| ||| |||||||||| | Sbjct 8642 TCAAGGCGACCTGCCCTTCATCGACAACGGTGACGGCACGGTGACCTTCAAGTTCGTCGG 8583 Query 9862 CTACGCCTCGTGGAAGAACCCAAAGACTGACGCAATGCAGGACATCACCCTGCGTGTGGC 9921 || ||| | |||| ||| | || ||| ||| |||||||||| | Sbjct 8582 CTGGGCCAGCTACGAGAAG-----GACGG-CGAGATGATCCCGATCCCCCTGCGTGTCGT 8529 Query 9922 TGACTCCAAGGGCAAGACCATGAGCGTGGTCCCGAACATTTCCGGTGGCTCGACCCTGAA 9981 |||| ||||||||||| |||| | ||||||||||| || |||||||| || Sbjct 8528 TGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAA 8469 Query 9982 GCTGCGTTACTCGGTATTCCCGTACAAGTGGAACACCGCCGTTGGCGCTTCGGTCAAACT 10041 | | || | ||| | |||| ||| |||||| | |||| ||||| || || || || Sbjct 8468 GGTCCGCTTCTCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCT 8409 Query 10042 GCAACTGGAAGGCGTCATGCTGATCGACCTCGTTGAGTTCGGTGGCGGTGGCGACGATGA 10101 |||||||||||| ||||||||| | | || || |||| | | | ||| | || || Sbjct 8408 CCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGAT---GATGGTCAAGACGA 8352 Query 10102 CTGGGGCGATGCTGTGGAAGAAGGCGGCTTCGTGGC 10137 |||||||| || |||||| | ||||| ||||| Sbjct 8351 CTGGGGCG--GC-CAGGAAGAGGACGGCTATGTGGC 8319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130711637494920