Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq188 237 4e-58 >seq188 Length=347077 Score = 237 bits (262), Expect = 4e-58 Identities = 232/295 (79%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 26158 CGCCTGCAGCGCGATCAGCTGCTCGGCGTTTTCGTGGCAGGTGGTGTAGTTGCCGGCGAC 26217 |||||||||||| |||| ||||||||||||||||||||||| | ||||| |||| || Sbjct 16223 CGCCTGCAGCGCCCTCAGTTGCTCGGCGTTTTCGTGGCAGGTCTGGAAGTTGGCGGCAAC 16282 Query 26218 GGTTGCGGCGACGGCAGAGAGCGTAACGCCCGCGGCGGCCGCATCAGCGCTTC---CGGG 26274 |||| |||||||||||||||||| || ||| |||| |||||||||||| || |||| Sbjct 16283 GGTTCCGGCGACGGCAGAGAGCGCAATGCCTGCGGAGGCCGCATCAGCATCTCGGGCGGG 16342 Query 26275 ATCGCCCACCGGCACGTTGGCGGCTGCTGCGTCGTGCACGCGCACAAAGCCGACAG-GAA 26333 ||| || || | |||||| || |||||||||| |||||||||||| || | | Sbjct 16343 CTCGGGCA---GCTCACCGGCGGCGGCAGCGTCGTGCAGGCGCACAAAGCC-ACGGTTGA 16398 Query 26334 CAACGCAGGCACGATCCGCTTCGCGGTCCACATAAACCGGAACCTCCTTGACGATGGTGT 26393 | ||| ||| ||| |||| | |||||| || ||||||||||||| |||||| | Sbjct 16399 TAGTGCAAGCAGCATCGGCTTGAACGGGCACATAGACGGGAACCTCCTTGATGATGGTTT 16458 Query 26394 CGCCCTTCTCGCGGACGACCTGGACACGATCAACGTACTGCGTGACGACCTTGAC 26448 ||||||||||||| ||||| |||| || || ||||| || |||||||||||||| Sbjct 16459 CGCCCTTCTCGCGAACGACGCGGACGCGGTCGACGTATTGGGTGACGACCTTGAC 16513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118778832088336