Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq5373 95.1 3e-15 >seq5373 Length=95907 Score = 95.1 bits (104), Expect = 3e-15 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 26414 CACCAGCTCGATGTTTTCCGCGAC-GCAGCCGCAACCGAAGTCTTCGACGACATACGCGT 26472 ||||| || |||||||| || | ||||| | || || ||||||| | || | | Sbjct 55378 CACCAATTCAATGTTTTCAGCCATTGCAGCAAGA-CCTAAATCTTCGATGTAGTAATCTT 55436 Query 26473 CGTTCGACGATTCGTAGTTCTCGATTTGGTCGCGCTTCGGGTTGTCGATCAGCGAGCGAC 26532 |||| || ||||| |||||||||||||| ||||| || | || || | | | |||| Sbjct 55437 CGTTTGAAGATTCATAGTTCTCGATTTGATCGCGTTTGGCATTATCTACTACGGTACGAC 55496 Query 26533 GGCGCGCACCTTCCTGGAAGTAGATCGACAGGTTCTCCAGCTTCGTCACCATCATCGCGC 26592 | || | |||||||| | ||||| || ||||| || | | ||||||| || || Sbjct 55497 GACGAGATCCTTCCTGAACATAGATTGAAAGGTTGTCAAATGTTGTCACCAAGATTGCAT 55556 Query 26593 GCTTCGGGAAGAACGGCACACGCA-CGGCCGGCAGGTTGCCGATGCGCTTCTGGCTGA 26649 | ||||||||||||||| ||| | | || | ||||| ||||| || ||||||| Sbjct 55557 TTTCTGGGAAGAACGGCACA-GCATAGACAGGTAAATTGCCCATGCGTTTTTGGCTGA 55613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129376900363544