Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015269.1 Length=118351 Score E Sequences producing significant alignments: (Bits) Value seq5 147 2e-30 seq96199 138 9e-28 >seq5 Length=869209 Score = 147 bits (162), Expect = 2e-30 Identities = 228/318 (72%), Gaps = 6/318 (2%) Strand=Plus/Minus Query 46143 ATGAGTGTGCATACATGGACGTAAGCAACCCTTTGAGAACTCTCCCGGATTCCAGAAGGT 46202 ||| || |||||||| || || | ||||| | ||||| || || || | ||||| Sbjct 100360 ATGGGTATGCATACAGGGCCGCAGACAACCAAGTTCAAACTCACCAGGGTTATAAAAGGT 100301 Query 46203 TAGAATTTCCCCACGATCATCAATGCCCTTTTTCAGATTA-TGATAAATCTTGGCTAGTT 46261 || || || ||||||| || || ||||| |||| || ||| | | ||| | |||| Sbjct 100300 CAGGATCTCGGCACGATCGTCGATCCCCTTGCTCAGGTTGCTGACGATTTTTGCC-AGTT 100242 Query 46262 GGTC-AAACATAAGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGT 46320 | || ||| | || ||||||| || ||| | || ||||| |||||||| || || Sbjct 100241 GATCTAAAGTTGAG-CCATCGGGCTTCTGCCAACGCCGGCCTTGCACACCATATACCCGG 100183 Query 46321 CCCATATCATCCTCACCTTTACGGTATGGATTGTCTAGCCAAGC-TGAGTTTTCATTTGC 46379 ||||||||||| ||||| ||||| | || || |||| ||| || ||| ||||| || || Sbjct 100182 CCCATATCATCTTCACCCTTACGATGCGGGTTATCTAACCAGGCCTGA-TTTTCGTTGGC 100124 Query 46380 ATTAGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCATACCCACG 46439 ||| |||||||| || ||| ||| ||||| ||||||||||| || |||||| || | Sbjct 100123 ATTCGCATTCCAGGTATTACAACCGATAGCACGGAATTGTGCGGCACTGTCATAACCCCT 100064 Query 46440 TAGATACCCAATCATTTC 46457 || || || | || ||| Sbjct 100063 TAAGTATCCTAACAATTC 100046 >seq96199 Length=2664 Score = 138 bits (152), Expect = 9e-28 Identities = 273/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 46113 GTATAATGTATCTCCCAAAATAGAGAACTGATGAGTGTGCATACATGGACGTAAGCAACC 46172 |||||| ||||| ||||| | ||| || || ||||||||||| || ||||| ||||| Sbjct 2283 GTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGCATACAAGGGCGTAAACAACC 2224 Query 46173 CTTTGAGAACTCTCCCGGATTCCAGAAGGTTAGAATTTCCCCACGATCATCAATGCCCTT 46232 || || || ||||| | || || | ||||| || ||||||||||| || || Sbjct 2223 TAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCACCGCGATCATCAATTCCTTT 2164 Query 46233 TTTCAGATTAT-GATAAATCTTGGCTAGTTGGTCAAACATAAGACCATC-GGAATTAGTC 46290 | |||| ||||| | || || || |||| |||||| || | | | Sbjct 2163 CGATAAGTTATCGATAACTTTTTTA-AGCTGATCAAGGTGGCTACCATCAGGGCGTTGCC 2105 Query 46291 CACTGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTCACCTTTACGGTATGGA 46350 |||| || |||||||||||||| || || ||||||||||||||||| |||| | ||| Sbjct 2104 AACTG-CGCCCTTGAACACCATACACACGGCCCATATCATCCTCACCACTACGATGCGGA 2046 Query 46351 TTGTCTAGCCAAGCTGAGTTTTCATTTGCATTAGCATTCCATGTGTTAACACCAATAGCG 46410 || || ||||| ||| ||| || || || || |||||||| || || || ||| | Sbjct 2045 TTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATATCA 1986 Query 46411 CGGAATTGTGCTGCTGAGTCATACCCACGTAGATACCCAATCATTTCCATTATTGCTTGT 46470 || || ||||| || ||| || ||||||| ||| || | | ||| ||| || | Sbjct 1985 CGAAACTGTGCAGCGCTGTCGTAACCACGTAAATAACCCAGTAACTCCGCTATCGC-CGC 1927 Query 46471 TTTGCAAACGC-CTTACGAGTAGTAATAAGGGGGAA 46505 |||| ||| || ||| || || || || || || || Sbjct 1926 TTTGTAAAAGCTCTTTCGCGTGGTGATGAGCGGAAA 1891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377766760816352