Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq114 242 4e-59 seq70102 163 3e-35 >seq114 Length=395947 Score = 242 bits (268), Expect = 4e-59 Identities = 369/524 (70%), Gaps = 10/524 (2%) Strand=Plus/Plus Query 154590 TGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAG 154649 ||||||||||| ||||| || |||| || || || ||||| ||| | || |||| Sbjct 175354 TGGTTATGTGAGATCACCGGATTTGCAAAAATGTCCTTCCAACCAAACTCTGGTGCACAA 175413 Query 154650 GGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAA 154709 ||||| ||||| ||| | | | ||||| || ||||| || | |||||| | | Sbjct 175414 GGTGAATATGCTGGATTAATGGTAATCCGTGCTTACCACCATAGCCGTGGAGATTTTGAT 175473 Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769 ||| || | |||||||| || | || ||||| || || || ||||| |||| ||| Sbjct 175474 AGAGATATCTGTTTGATCCCTGCTTCGGCACACGGTACCAACCCTGCATCTGCTTCTATG 175533 Query 154770 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGAT 154829 || || ||||||| || | || || |||||||| ||| ||||| || | |||| Sbjct 175534 GCCGGATTGAAAGTGGTTGTGGTAAAATGTGATGAACGTGGAAACATTGATGTGGAAGAC 175593 Query 154830 CTAGAGAAGAAAGCAATCATGAATAC-----ATTTGAACTGTCATGTATTATGATTACAT 154884 || || ||||||| | || | | ||||||| || | ||| | || | Sbjct 175594 CTTAAGGCAAAAGCAACAGAGCATGCTGCTAAGTTGAACTC----GT-TAATGGTGACTT 175648 Query 154885 ACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATG 154944 | |||||||| || |||||||||||| ||| | |||| ||||| ||| | |||| Sbjct 175649 ATCCATCTACCCACGGTGTATTTGAAGAGCCGATTGTAGAGATCTGTAATATCATCCATG 175708 Query 154945 ACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAA 155004 | |||||||||||||| ||| | ||||| || || | ||||| ||||| ||| | | | Sbjct 175709 AAAATGGTGGTCAGGTGTATATGGATGGTGCGAACATGAATGCGCAGGTTGGATTGACCA 175768 Query 155005 AACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTC 155064 ||| || | ||| ||||| || ||||| | |||||||| ||||| |||||||||| Sbjct 175769 GCCCAGGTTATATTGGCGCAGACGTTTGTCACTTGAACTTACACAAAACCTTCTGTATTC 175828 Query 155065 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 ||||||| ||||| |||||||| | |||||||| ||||| ||| Sbjct 175829 CACATGGTGGTGGTGGTCCTGGTATGGGTCCTATCGGTGTGGCA 175872 >seq70102 Length=5097 Score = 163 bits (180), Expect = 3e-35 Identities = 436/657 (66%), Gaps = 26/657 (4%) Strand=Plus/Plus Query 154461 TGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCT 154520 || |||||||| | ||||| |||| || | || || | | ||| |||||||| Sbjct 3211 TGTACAATGAAGCTTAATGCGACAGCTGAGATGATCCCAATCACTTGGCCTGAGTTTGCA 3270 Query 154521 AACGTGCATCCACA-TACACCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGA 154579 ||| | || ||| | | | |||| ||| | |||||| || ||| || ||||| Sbjct 3271 AACTTACACCCATTCTGCCCACTTGAT-CAGGCAGCGGGTTACCA---AATCAT-GATGA 3325 Query 154580 C----TTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTA 154635 | ||||| | |||||| | |||||||| | ||| | | ||| ||||||||| Sbjct 3326 CAGAGTTACATGACTGGTTAGTAAACATCACAGGTTACGATGCAGTTTCACTACAACCTA 3385 Query 154636 ACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGAT 154695 || |||| |||| ||||| || ||||| | | || || | |||||| | || | Sbjct 3386 ACTCAGGTGCACAAGGTGAATACGCAGGCTTAATCGCGATTCGTAAATACCA-CGAG--T 3442 Query 154696 CAGGAGATGA---TAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATC 154752 || | | ||| | | | || ||||||||||| ||| ||||| || || || || | Sbjct 3443 CACGCGGTGAAGGTCACCGTAACGTATGTTTGATCCCAAGTTCAGCGCACGGTACAAACC 3502 Query 154753 CTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTA 154812 | || ||| |||||| | |||||| | || | ||| | |||||| | | |||| Sbjct 3503 CAGCGTCTGCACAAATGGCAAGCATGAAAATCGTGGTTGTTGACTGTGATAAAAACGGTA 3562 Query 154813 ACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATAC--ATTTGAA---CTGTC 154867 || | || || ||| || | |||||| ||| | || |||| || || Sbjct 3563 ACGTTGATATGGCAGACCTTAAAGCGAAAGCC-----GAAGAGGTATCTGAAAACCTATC 3617 Query 154868 ATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGAT 154927 ||||| ||||| || |||||||||||||| ||||| | ||| | ||| | | || Sbjct 3618 TTGTATCATGATCACTTACCCATCTACACACGGTGTTTACGAAGAAACAATTCGTGAAAT 3677 Query 154928 ATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGC 154987 ||| | ||||| || | | || ||||| || || | || || ||||| | || || Sbjct 3678 CTGTGACATCGTGCACCAGCACGGCGGTCAAGTGTACATGGACGGCGCAAACATGAACGC 3737 Query 154988 ACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACA 155047 |||||||| | ||| || || ||| | || |||| || || ||| |||| Sbjct 3738 GCAGGTAGGTGTTACAAGCCCTGGTTCAATCGGTTCTGACGTATCGCACCTTAACCTACA 3797 Query 155048 TAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||||||||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 3798 CAAAACATTCTGTATTCCACACGGTGGTGGTGGTCCAGGTGTTGGCCCTATCGGTGT 3854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577907862522240