Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq114 237 2e-57 seq70102 170 2e-37 >seq114 Length=395947 Score = 237 bits (262), Expect = 2e-57 Identities = 368/524 (70%), Gaps = 10/524 (2%) Strand=Plus/Plus Query 159265 TGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAG 159324 ||||||||||| ||||| || |||| || || || ||||| ||| | || |||| Sbjct 175354 TGGTTATGTGAGATCACCGGATTTGCAAAAATGTCCTTCCAACCAAACTCTGGTGCACAA 175413 Query 159325 GGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAA 159384 ||||| ||||| ||| | | | ||||| || ||||| || | |||||| | | Sbjct 175414 GGTGAATATGCTGGATTAATGGTAATCCGTGCTTACCACCATAGCCGTGGAGATTTTGAT 175473 Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444 ||| || | |||||||| || | || ||||| || || || |||||||| || ||| Sbjct 175474 AGAGATATCTGTTTGATCCCTGCTTCGGCACACGGTACCAACCCTGCATCTGCTTCTATG 175533 Query 159445 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGAT 159504 || || ||||||| || | || || |||||||| ||| ||||| || | |||| Sbjct 175534 GCCGGATTGAAAGTGGTTGTGGTAAAATGTGATGAACGTGGAAACATTGATGTGGAAGAC 175593 Query 159505 CTAGAGAAGAAAGCAATCATGAATAC-----ATTTGAACTGTCATGTATTATGATTACAT 159559 || || ||||||| | || | | ||||||| || | ||| | || | Sbjct 175594 CTTAAGGCAAAAGCAACAGAGCATGCTGCTAAGTTGAACTC----GT-TAATGGTGACTT 175648 Query 159560 ATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATG 159619 |||||||||| || |||||||||||| || | |||| ||||| || | |||| Sbjct 175649 ATCCATCTACCCACGGTGTATTTGAAGAGCCGATTGTAGAGATCTGTAATATCATCCATG 175708 Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679 | |||||||||||||| ||| | |||||||| || | ||||| ||||| || | | | Sbjct 175709 AAAATGGTGGTCAGGTGTATATGGATGGTGCGAACATGAATGCGCAGGTTGGATTGACCA 175768 Query 159680 AACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTC 159739 ||| || | ||| ||||| || ||||| | |||||||| || || |||||||||| Sbjct 175769 GCCCAGGTTATATTGGCGCAGACGTTTGTCACTTGAACTTACACAAAACCTTCTGTATTC 175828 Query 159740 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 ||||||| ||||| |||||||| | |||||||| ||||| ||| Sbjct 175829 CACATGGTGGTGGTGGTCCTGGTATGGGTCCTATCGGTGTGGCA 175872 >seq70102 Length=5097 Score = 170 bits (188), Expect = 2e-37 Identities = 436/654 (67%), Gaps = 20/654 (3%) Strand=Plus/Plus Query 159136 TGTACTATGAAACTAAACGCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCT 159195 ||||| ||||| || || || || | || |||| || | | ||| |||||||| Sbjct 3211 TGTACAATGAAGCTTAATGCGACAGCTGAGATGATCCCAATCACTTGGCCTGAGTTTGCA 3270 Query 159196 AACGTGCATCCACA-TACACCTATGATACAGACCATGGGTTATCAAAAAATTATAGATGA 159254 ||| | || ||| | | | |||| ||| | |||||| |||| || || || Sbjct 3271 AACTTACACCCATTCTGCCCACTTGAT-CAGGCAGCGGGTTACCAAATCATGATGACAGA 3329 Query 159255 CTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGC 159314 ||||| | |||||| | |||||||| | ||| | | ||| ||||||||||| | Sbjct 3330 GTTACATGACTGGTTAGTAAACATCACAGGTTACGATGCAGTTTCACTACAACCTAACTC 3389 Query 159315 AGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGG 159374 ||| |||| ||||| || ||||| | | || || | |||||| | || ||| | Sbjct 3390 AGGTGCACAAGGTGAATACGCAGGCTTAATCGCGATTCGTAAATACCA-CGAG--TCACG 3446 Query 159375 AGATGA---TAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGC 159431 | ||| | | | || ||||||||||| ||| ||||| || || || || || || Sbjct 3447 CGGTGAAGGTCACCGTAACGTATGTTTGATCCCAAGTTCAGCGCACGGTACAAACCCAGC 3506 Query 159432 ATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACAT 159491 || ||| |||||| | |||||| | || | ||| | |||||| | | || ||| | Sbjct 3507 GTCTGCACAAATGGCAAGCATGAAAATCGTGGTTGTTGACTGTGATAAAAACGGTAACGT 3566 Query 159492 AGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATAC--ATTTGAA---CTGTCATGT 159546 || || ||| || | |||||| ||| | || |||| || || ||| Sbjct 3567 TGATATGGCAGACCTTAAAGCGAAAGCC-----GAAGAGGTATCTGAAAACCTATCTTGT 3621 Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||| || || ||||||||||| ||||| | ||| || || | | || ||| Sbjct 3622 ATCATGATCACTTACCCATCTACACACGGTGTTTACGAAGAAACAATTCGTGAAATCTGT 3681 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | || || || || | || ||||| || || | || || ||||| | || || ||| Sbjct 3682 GACATCGTGCACCAGCACGGCGGTCAAGTGTACATGGACGGCGCAAACATGAACGCGCAG 3741 Query 159667 GTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAA 159725 |||||| | ||| || || | || ||| | || |||| || || ||| |||| || Sbjct 3742 GTAGGTGTTACAAGCCCTGGTT-CAATCGGTTCTGACGTATCGCACCTTAACCTACACAA 3800 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||||||||||| || ||||| ||||| || || || ||||| ||||| Sbjct 3801 AACATTCTGTATTCCACACGGTGGTGGTGGTCCAGGTGTTGGCCCTATCGGTGT 3854 Score = 89.7 bits (98), Expect = 6e-13 Identities = 172/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 158508 |||||| | |||||||| ||||| ||||| || ||||||||||| |||||| |||||| Sbjct 2491 TTTGGTGTACCTATGGGTTACGGTGGTCCACACGCTGCATTCTTCGCAACACGCGACAAG 2550 Query 158509 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAA 158568 || ||| | |||| || | ||| | ||| || ||| || |||||| | Sbjct 2551 TACAAGCGTTCACTACCAGGTCGTATTATCGGTGTTTCTAAAGACCGCTTAGGTAACGAC 2610 Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628 |||| | | ||| | || || | || || ||||| | | || ||||| | | Sbjct 2611 GCATTACGTATGGCAATGCAAACACGTGAACAACATATTCGTCGTGAAAAAGCCAACTCA 2670 Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCAT 158688 |||||||| ||||| |||| | | || || || ||| | | |||||| || | || || Sbjct 2671 AACATCTGTACAGCGCAAGTATTACTAGCGAACATGGCAGCGTTCTACGCGGTTTACCAC 2730 Query 158689 GGTGCAGATGGACT 158702 ||| || | || || Sbjct 2731 GGTCCACAGGGCCT 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586726350048960