Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq34866 96.9 7e-16 >seq34866 Length=13211 Score = 96.9 bits (106), Expect = 7e-16 Identities = 192/283 (68%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 1998 TCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTT 2057 || || || ||||| || ||||| |||||||| ||| ||| ||||||||||| || ||| Sbjct 5642 TCTACCACGATTTCTGTAGTGTATTTTTCTTGGCCTGATTGATCAGTCCATTTACGCGTT 5701 Query 2058 TTTAACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCA 2117 | ||| ||||| ||||| | | ||| ||||| | || || || | ||| Sbjct 5702 TGTAAACGACCTTCGATGTACACTTGTGAACCTTTACGAAGGTATTCACCAGCAACTTCT 5761 Query 2118 GCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGT---TTCTTCTTTTGGCTCGCCA 2174 |||| || ||||| | || | | |||||| || || |||| || || || Sbjct 5762 GCTAGTTTGCCAAATAACACGACACGGTGCCATTCAGTACGCTCTTGCATTTGC---CCT 5818 Query 2175 GTGCTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCG 2234 ||| ||||||| ||||| | || | || || | | | || || || |||| || Sbjct 5819 GTGTTTTTATCTTTCCAGCTATCTGTCGTAGCAATGCTGATATTCGCTACGCCATTGCCA 5878 Query 2235 TTAGGTATGTAACGAATTTCTGGATCTTGACCAGCATTACCAA 2277 ||||| || ||||| | |||||||||||| || |||||||| Sbjct 5879 TTAGGCATATAACGTACTTCTGGATCTTGGCCTAAATTACCAA 5921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97751932542616