Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq26 91.5 4e-14 seq32195 86.0 2e-12 >seq26 Length=549101 Score = 91.5 bits (100), Expect = 4e-14 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 37588 CTGAAGAATCTGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGT 37647 |||||| |||||||| ||| | |||||||| || || |||| ||| | ||||| Sbjct 110089 CTGAAGGCGCTGGCGAAGGAGATGGAGTGCCCGGTGATCGCGCTGTCGCAGCTCAACCGC 110030 Query 37648 AATTTGGAGCAGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTA 37707 |||| ||||| | |||||||| ||| || ||||| | |||||||| || | Sbjct 110029 TCGCTGGAACAGCGCCCCAACAAGCGCCCGGTCATGTCCGACCTGCGTGAGTCCGGGGCC 109970 Query 37708 ATCGAGCAGGAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAG 37767 ||||||||||| || || ||||| | | | || ||||||||| ||||||||| || Sbjct 109969 ATCGAGCAGGACGCCGACGTGATCATGTTCATCTACCGCGACGAGGTCTACAACCCGGAG 109910 >seq32195 Length=14812 Score = 86.0 bits (94), Expect = 2e-12 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 37597 CTGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAG 37656 ||||| ||||| | | || |||||||| ||| | || ||| | ||||||| | ||| Sbjct 1505 CTGGCAAAAGAACTGCAGTGTCCGGTTATTGCACTATCGCAGCTTAACCGTACCCTAGAG 1446 Query 37657 CAGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAG 37716 || ||||| | || || || ||| ||||||||||||| || ||| |||||||||| Sbjct 1445 CAACGTGCCGATAAACGCCCAATCAACTCCGACTTACGTGAATCAGGCTCAATCGAGCAG 1386 Query 37717 GAAGCTGATGTGATTTTCATGGTTTATCGCGACGAGAAGTACAACCCGCAGACAGAGATG 37776 || || || | || | | |||| || || || ||| || || |||||| | | Sbjct 1385 GATGCCGACTTAATCATGTTTATTTACCGTGATGAAGTGTATAA--CGAAGACAGTGCAG 1328 Query 37777 --AAAGGCGTCACTGAAATCATC 37797 |||||||| | ||||||||| Sbjct 1327 AAAAAGGCGTGGCCGAAATCATC 1305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150847647902712