Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015465.1 Length=33004 Score E Sequences producing significant alignments: (Bits) Value seq1 80.6 6e-11 >seq1 Length=1655743 Score = 80.6 bits (88), Expect = 6e-11 Identities = 223/337 (66%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 568 TCGGCGGAGCCTGGCCCCTGGCGCACAGATCGCACGCCGTACCTGCGCGAGCCGATGGAA 627 ||||| ||||| || | | || || | |||||||| ||| |||||||| ||||| Sbjct 164933 TCGGCCGAGCCGGGGCAGTACCGGACCGCGCGCACGCCCTACGTGCGCGAGATCATGGAC 164874 Query 628 TGTCTGAGCCCCA-CTAGCCCATACCGGCGTGTGGTGCTGATGTTCGGCAGC-CAGCTCG 685 | ||||||||| | | || | || ||| | ||| | ||| ||| || ||| ||| Sbjct 164873 CGGCTGAGCCCCGGCGATCCGAC-CCAGCGGATCGTGTTCATGAA-GGCCGCGCAGGTCG 164816 Query 686 GCAAGACGGAGGTGGTACTCAACTGGCTTGGCGCAATCATTCATCTATGGCCGGCGCCGA 745 || ||| |||| | ||||||| | ||| |||| || | ||||| |||| Sbjct 164815 GCGCGACCGAGGCCGGCAACAACTGGATCGGCTTCGTCATCCACCAGGCGCCGGGCCCGA 164756 Query 746 CGCTGTTGGTGCAGCCGACGCTGGATATGGCCAAGCGCCTCAACAGGCAGCGCCTTGAGC 805 |||| ||||||||||||| |||| ||||||||||| | | ||||| | || | Sbjct 164755 TGCTGGCGGTGCAGCCGACGGTGGAACTGGCCAAGCGCAACTCGCGCCAGCGGATCGACC 164696 Query 806 CTCTGCTGCGTGAAACGCCAGTGCTGTCTGAGCTGATCGCACCGGCCAGGGCCCGCGACT 865 | ||| | ||| | || | ||| |||| | |||||| | |||||||| Sbjct 164695 CGCTGATCGATGAGAGCCCGGACCTGCGCGAGCGAGTGAAACCGGCGCGATCCCGCGACG 164636 Query 866 CAGGTAACACGATGTTCCTCAAAGAGTTCAGGGGCGG 902 | || ||||||||| | || |||||| ||||| Sbjct 164635 CGGGCAACACGATGCTGTCGAAGGAGTTCGCAGGCGG 164599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105265416920912