Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_015719.1 Length=40940 Score E Sequences producing significant alignments: (Bits) Value seq34826 109 1e-19 >seq34826 Length=13225 Score = 109 bits (120), Expect = 1e-19 Identities = 259/385 (67%), Gaps = 20/385 (5%) Strand=Plus/Minus Query 9457 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCT--GCTCGT--CTGGAAGCACAT 9512 |||||| |||||| || | ||| |||| ||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 9513 GAAGCGAACCCGCCGAAGGTTCAGAAGGGTAAGAAACCTCTGAAGCCGTATGAAGGCGAC 9572 |||| ||||| ||| || | | | | ||| || || |||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 9573 ATGCCATTCTTCGACAATGGTGATGGTACAACCACGTTCAACTTCAAGTGCTACGGTTCG 9632 |||| ||| ||||||| ||||| || |||| | | |||||||| | ||| | | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGG------CACGGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 9633 TACGAGGACAAGAAAACCGGCGAGACCAAGAAGATTGTTCTGGGTGTAGTTGACGCCAAG 9692 | || |||| |||||||| | ||| ||| |||| |||||||||||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 9693 GGCAAACGTATCCAAGATGTTCCAATTATTGGTGGTGGTTCCAAAGTGAAAATTCGCTTC 9752 ||||| ||| ||||| || | || ||||| ||| | | || | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 9753 TCTCTGGTACCGTATGGCTGGT--CCG-CTGTGGCTGGTGCTTCCGTTAAGTTGCAACTG 9809 || | || || || |||||| ||| | |||| | || ||||| ||| | |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGG---GCGCCTCCGTGAAGCTCCAACTG 8402 Query 9810 GAAGGCGTAATGCTGGTCGAACTGG 9834 |||||| | |||||| | |||||| Sbjct 8401 GAAGGCTTCATGCTGACCAAACTGG 8377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130606263510864