Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_016570.1 Length=157304 Score E Sequences producing significant alignments: (Bits) Value seq5 109 6e-19 >seq5 Length=869209 Score = 109 bits (120), Expect = 6e-19 Identities = 286/429 (67%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 52475 CAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTT 52534 |||||||| |||| | |||||||| ||| | |||||||| | | | | | | ||||| Sbjct 711184 CAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTT 711125 Query 52535 CTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGCCAGAT 52594 |||||| | || ||||| ||||| || || | | || | || |||||| | Sbjct 711124 CTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAA 711065 Query 52595 GGGAACATAGCATGTTGCCGAT-CCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGG 52653 ||| | | || | || || |||||||| | ||||||||| ||||| || | | Sbjct 711064 GGGGT-AGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTG 711006 Query 52654 CACCAGTC---AAATACTTGATGAAT--GGAACCAGACCTGTATGGACCATTTCCCCTTT 52708 | ||| |||| ||| || || ||| ||| || ||||| | ||| || || Sbjct 711005 CG---GTCTGGAAATGCTT-ATAAAACGGGATACAG-CCAGTATGAAAGGCTTCGCCATT 710951 Query 52709 ACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCACGTTT 52768 |||||| |||||||| | | ||||| || | | | || || || || || | Sbjct 710950 ACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTG 710891 Query 52769 GGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTATCACCAGT 52828 || || || | || ||| | | |||||||| || || |||| | |||||| Sbjct 710890 CGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACA 710831 Query 52829 TTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGG 52888 | |||| ||| || ||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 710830 CTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGG 710771 Query 52889 TGTTGGAAG 52897 ||| || || Sbjct 710770 TGTCGGCAG 710762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502111014627840