Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq100896 484 1e-131 seq5 333 5e-86 seq101083 86.0 1e-11 seq19112 86.0 1e-11 seq5373 86.0 1e-11 seq7 86.0 1e-11 seq1110 84.2 4e-11 >seq100896 Length=2131 Score = 484 bits (536), Expect = 1e-131 Identities = 794/1133 (70%), Gaps = 16/1133 (1%) Strand=Plus/Minus Query 207817 CTCATTACAGTTGGAAATCACCGAACTCGGCAGTATCTACTTCTGAGTCGATCTGACCTA 207876 |||||||||| | ||| ||||| || || | | ||| |||| ||||| || ||||| | Sbjct 1661 CTCATTACAGGTCGAAGTCACCAAAGTCAGATGCATCAACTTGAGAGTCAATTTGACCAA 1602 Query 207877 CCAGGTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACGTTGTCAGTTACCAGCC 207936 | |||||||| | ||| |||| || |||||||| ||||||||||||| ||| | || Sbjct 1601 CAAGGTAAGAGCTGATTTCAGCTTCTTGTGGAGCAACTTGAACGTTGTCAGATACTAACC 1542 Query 207937 ATGAGTTAATCCATGGAATTGGGTTAGAGTTGGTTTTGAA-TG-GAAGATCCAAACCGAT 207994 | ||||| ||||| ||||| |||||| || ||| ||| || | || | | || | Sbjct 1541 AAGAGTTGATCCACGGAATAGGGTTACTCTTACTTTCGAACTGTGTAGGT--AGGCCTAC 1484 Query 207995 CGCCTGCATACGGATGTTGGTAATGTACTCAACATACTGGCAGAGGATCTCTTTGTTCAG 208054 ||| |||||| || || ||||| ||||| || ||||| | ||| |||||||| || Sbjct 1483 CGCAGTCATACGTGCATTAGTTATGTATTCAACGTATTGGCATAAGATATCTTTGTTAAG 1424 Query 208055 ACCGATCATTGAACCATCTTTGAACAGATAGTCAGCCCACTCTTTTTCTTGCTGAGCGGT 208114 ||| ||||| |||||||| |||||||| || || ||||| ||||||||||| | || | Sbjct 1423 ACCAATCATAGAACCATCCTTGAACAGGTATTCTGCCCAATCTTTTTCTTGTTCTGCTGC 1364 Query 208115 AGCAACGAACATGTCGTATGACTCTTGACGACACTCTGCTGCAATCTCAGCCATCTCTGG 208174 |||| ||||| | || |||| |||||||| |||||||| ||||| ||||| Sbjct 1363 TTCAACAAACATCTGAATTGCTTCTTCACGACACTGTGCTGCAACGATTGCCATTTCTGG 1304 Query 208175 ATCATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGTACCAACCATGTGAAGTGC 208234 || |||||||| | ||| | ||| | ||||||||| || ||| | ||| | || Sbjct 1303 GTCGTCTTTACCTTCTTGCATAATGTTCAAGATGTGCTGTGTGCCAGATAAGTGTAACGC 1244 Query 208235 TTCGTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTCCATCAGCTTACGTTCGGC 208294 ||| ||||| ||||| | |||||||| || || ||||||||||||| | ||| || || Sbjct 1243 TTCATCACGGGCGATTAGCTTGATGATTTTTGCATTACCTTCCATCAATTCACGCTCAGC 1184 Query 208295 AAATGCGAATGAGCAAGCGAAGGATACGTAGAAACGAATAGCTTCAAGTGAGTTGATAGA 208354 || || ||||| ||||| ||| ||| ||||||||||| ||||| | ||| | || Sbjct 1183 GAAAGCAAATGAACAAGCAAAGCTTACATAGAAACGAATCGCTTCTAAGATGTTAACCGA 1124 Query 208355 TTGCAGAGCCAGGTACAG-TGCTTTCTTAATAGCACGAAGATTAACATTAACCTTCTCGC 208413 || || ||||| || |||||| |||| || | | | || ||||| | || | Sbjct 1123 CATCATTGCTAGGTAAAGTTGCTTT-TTAAGGTCAAATAAACTGACTTTAACTTCTTCAC 1065 Query 208414 CATTGACTACGTGGTCACCCAGACC---CAGGTAATAGTACTGGTTGATCAAGGCAATCA 208470 | |||| || || | ||| ||| |||| || || | |||| | ||| | Sbjct 1064 CGTTGATCACATGTTTACCTTCACCATATAGGTTGTA-AACAG--AAATCATGTTAATTA 1008 Query 208471 GTTTGTCGTAGTAATGGGAAACAGATGCAGCACGTTTCTTGATATGTTCGTTATCTACAA 208530 | |||||||| | | || | ||||||| | |||| | ||||| ||| | Sbjct 1007 AATCATCGTAGTACTTAGTTACCGCATCAGCACGCTCACTGATCTTCTCGTTGCTTACGA 948 Query 208531 CGTCATCAAAGACAATGGAAGGATCGTTAACG--ATGTTCCTGATGATGTGAGTATAGCT 208588 || ||||||| || |||| | | || | ||| | || ||||| || || Sbjct 947 TATCGTCAAAGATAAGTTCAGGA--GATTGCGTAACGTTACGAATAATGTGCGTGTATGA 890 Query 208589 ACGACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTTTCCAGCTCTGGGAT 208648 ||| || || ||||||||| ||| |||| || ||| ||| ||||| | ||| || || Sbjct 889 ACGGCTATGAATGGTTTCACTGAACGCCCATGTTTCAATCCAAGTTTCTAACTCAGGAAT 830 Query 208649 AGAGCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATAGAGTCCAGTAGTGT 208708 ||| || || | ||| |||||||| || |||||| || | | || || || || Sbjct 829 AGACACAATAGGTAATAACGCAACGTTAGGTGAACGGCCTTGTACACTATCAAGAAGCGT 770 Query 208709 CTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTAAAGCCATGTAGTC 208768 |||||||| | |||||| | || | ||| || ||||| |||||||| || | |||| Sbjct 769 TTGATATTTTAAGTTACTTAAAAATATGTGCTTTTCGTGTTCTGGTAACGCTTGGAAGTC 710 Query 208769 AATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTC 208828 || |||||| ||||| ||||||||||||||||| ||||| |||||||| || || Sbjct 709 AAGACGGTCTTTACTTACATCAACTTCTTCAGGACGCCAAAAGAACGAAAGTTGCTTTTC 650 Query 208829 AATGAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAAACGTTGACGTTTTG 208888 || || || || ||||| ||||| |||||||||||||| || ||||| || |||| Sbjct 649 GATTAGCTTTTCGAAGATAGGGTACTTTTGTTGGTCGTAACGTGACACGTTTACCGTTTG 590 Query 208889 ACCCAGGAACATGTGTTCTTGTAATTGATCGTTTTTGTTTTGGTTGAAAGTTG 208941 || | ||||| ||||||||||||| | || | ||| || | ||||||| Sbjct 589 GCCGAAAAACATCGGTTCTTGTAATTGGTTATTATGATTTCGGCTAAAAGTTG 537 >seq5 Length=869209 Score = 333 bits (368), Expect = 5e-86 Identities = 739/1095 (67%), Gaps = 18/1095 (2%) Strand=Plus/Minus Query 207821 TTACAGTTGGAAATCACCGAACTCGGCAGTATCTACTTCTGAGTCGATCTGACCTACCAG 207880 |||||| | |||||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 713629 TTACAGATCAAAATCACCAAAGTCGGCGGTATCGACTTCGTTATCAATCTGGCCCACCAG 713570 Query 207881 GTAAGAAGAAACTTCTACTTCCTGAGGAGCAACCTGAACGTTGTCAGTTACCAGCCATGA 207940 || || | || |||||| || || ||||| || ||||||| |||||||| | Sbjct 713569 ATAGGAGCTGATCTCAGATTCCTGCGGCGCCACCTGCACATTGTCAGACACCAGCCAGGT 713510 Query 207941 GTTAATCCATGGAATTGGGTTAGAGTTGGTTTTGAATGGAAGATCCAAACCGATCGCCTG 208000 || ||||| ||||| ||||| | |||| || | | | || |||| |||||| Sbjct 713509 ATTGATCCACGGAATGGGGTTTTGGGTGGTAGCAAAGCGTGGTTTTAAGCCGACCGCCTG 713450 Query 208001 CATACGGATGTTGGTAATGTACTCAACATACTGGCAGAGGATCTCTTTGTTCAGACCGAT 208060 ||| ||| | |||||||| |||||||||||||| || || || ||||||||||| || || Sbjct 713449 CATTCGGCTATTGGTAATATACTCAACATACTGACACAGAATATCTTTGTTCAGGCCAAT 713390 Query 208061 CATTGAACCATCTTTGAACAGATAGTCAGCCCACTCTTTTTCTTGCTGAGCGGTAGCAAC 208120 ||| || |||||||| ||||||||| | ||||| || |||||||||| || | | Sbjct 713389 CATCGAGCCATCTTTAAACAGATAGGCTGCCCAGTCCTTTTCTTGCTCCGCCGCGCGCAT 713330 Query 208121 GAACATGTCGTATGA---CTCTTGACGACACTCTGCTGCAATCTCAGCCATCTCTGGATC 208177 || ||| |||| || ||||| || |||||| ||||| || ||||| || ||||| Sbjct 713329 AAAGATGGCGTAAGATTCCTCTT--CG-CACTCTTTGGCAATTTCCGCCATTTCCGGATC 713273 Query 208178 ATCTTTACCAGAGTTCATCAGGTTGATGATGTGCTGAGTACCAACCATGTGAAGTGCTTC 208237 ||| | ||| | || | || | || |||||||| || | ||| || ||||| Sbjct 713272 ATCATCACCGCTGGCCAGAATATTCAGCATATGCTGAGTGCCGGTGAGGTGTAGCGCTTC 713213 Query 208238 GTCACGTGCGATCATTTTGATGATCTTAGCGTTACCTTCCATCAGCTTACGTTCGGCAAA 208297 || || || |||| ||| |||||||| || ||||||||||||| ||| || ||||| Sbjct 713212 ATCGCGGGCAATCAGCCGGATAATCTTAGCATTCCCTTCCATCAGCTCACGCTCAGCAAA 713153 Query 208298 TGCGAATGAGCAAGCGAAGGATACGTAGAAACGAATAGCTTCAAGTGAGTTGATAGATTG 208357 || || ||| || ||| || || || || || ||||| | | ||| | || Sbjct 713152 AGCAAAACTGCAGGCAAAGCTGACATAAAAGCGGATCGCTTCTAATACGTTTACCGACAT 713093 Query 208358 CAGAGC-CAGGTACAG-TGCTTTCTTAATAGCACG-AAGATTAACATTAACCTTCTCGCC 208414 | ||| |||||| || ||||| || | |||| ||| | | | | | ||| || Sbjct 713092 TA-AGCACAGGTAAAGCCGCTTT-TTCAGCTCACGCAAGGTGATC-TGCTCGGTCTTACC 713036 Query 208415 ATTGACTACGTGGTCACCCAGACC-CA--GGTAATAGTACTGGTTGATCAAGGCAATCAG 208471 ||| | | || || ||| || | | | ||| | || || ||||||| Sbjct 713035 ATTAATTTGATGAGTGCCTTCACCACAACGCTGA---TACAGATTAATGCCATCAATCAG 712979 Query 208472 TTTGTCGTAGTAATGGGAAACAGATGCAGCACGTTTCTTGATATGTTCGTTATCTACAAC 208531 | ||| |||||| ||| |||| | || || | || | ||||| | || Sbjct 712978 ATCGTCATAGTAACGGGTAACATCAACTGCCCGCTCTAAAATCCGCTCGTTCAGCATAAT 712919 Query 208532 GTCATCAAAGACAATGGAAGGATCGTTAACGATGTTCCTGATGATGTGAGTATAGCTACG 208591 || || |||| | || || | ||| || | ||| || || || ||||| || Sbjct 712918 ATCGTCGAAGATCTTATGCGGTTCAGCACTGATATTACGGATAATATGGGTGTAGCTGCG 712859 Query 208592 ACTGTGGATGGTTTCAGAGAAGCCCCAGGTCTCAGCCCATGTTTCCAGCTCTGGGATAGA 208651 ||||| ||||||||| ||| ||||||| ||| ||| ||||||||||| || ||||| Sbjct 712858 GCTGTGAATGGTTTCACTAAAGGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGGAATAGA 712799 Query 208652 GCAGATCGGGAGTAATGCAACGTTTGGACCACGGCCCTGGATAGAGTCCAGTAGTGTCTG 208711 ||||| | | || ||||| || || ||||| | |||||||| || ||||| Sbjct 712798 CACAATCGGCAACAGGGCGACGTTCGGCGAGCGACCCTGCACTGAGTCCAGCAGCGTCTG 712739 Query 208712 ATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTAAAGCCATGTAGTCAAT 208771 |||||||| || ||||| || | ||||| || || || ||||| | | | ||||| Sbjct 712738 GTATTTCAGATTGCTGATAAAGATATGTTTTTCATGCTCAGGTAATTGCTGGAAATCAAT 712679 Query 208772 ACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGTTTCTCAAT 208831 || || ||| || | ||||| || |||||||| || || || || || || Sbjct 712678 CCGATCTTTACTGACGTCAATCTCTTCCGGCCGCCAGAAAAAGCTCAGCTGCTTTTCGAT 712619 Query 208832 GAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAAACGTTGACGTTTTGACC 208891 || || ||||| ||| |||||| || || || ||||| || ||||| ||| | ||| Sbjct 712618 CAGCTTTTCAAAAATCGGATACTTTTGCTGATCATAACGGGAGACGTTTACGGCATTACC 712559 Query 208892 CAGGAACATGTGTTC 208906 | |||||| |||| Sbjct 712558 AAAGAACATCGGTTC 712544 >seq101083 Length=2117 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 16038 TATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCTCTAA 16097 |||||||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct 2038 TATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAA 2097 Query 16098 CCGTCTGAGCTA 16109 || |||||||| Sbjct 2098 CCAACTGAGCTA 2109 >seq19112 Length=29680 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 16038 TATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCTCTAA 16097 |||||||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct 3359 TATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAA 3300 Query 16098 CCGTCTGAGCTA 16109 || |||||||| Sbjct 3299 CCAACTGAGCTA 3288 >seq5373 Length=95907 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 ||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| Sbjct 62080 AATGGCGCGCCTGACAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTAT 62139 Query 16179 CC-ACTGAGCTA 16189 || ||||||||| Sbjct 62140 CCAACTGAGCTA 62151 >seq7 Length=747525 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 |||||||||||| | ||||||||||||| ||||| | ||||||||||| |||||||| Sbjct 439840 AATGGCGCGCCCGATAGGATTCGAACCTATGACCCACGGCTTAGAAGGCCGTTGCTCTAT 439899 Query 16179 CC-ACTGAGCTAAGAGCGC 16196 || ||||||||| | |||| Sbjct 439900 CCAACTGAGCTACGGGCGC 439918 >seq1110 Length=205023 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 16039 ATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCTCTAAC 16098 ||||||| ||| ||||||||||||||| |||||| ||||||||||| |||||||||| Sbjct 34535 ATGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAAC 34476 Query 16099 CGTCTGAGCTA 16109 | |||||||| Sbjct 34475 CAACTGAGCTA 34465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 909041749871520