Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq6372 149 2e-31 >seq6372 Length=86001 Score = 149 bits (164), Expect = 2e-31 Identities = 143/182 (79%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| |||||| ||||||||||||||||||| |||||| | |||||||||||||| | Sbjct 39395 ACGGCAAGCTGTCCTGCCAGCTCTACCAGCGCTCGGCGGACATCTTCCTCGGCGTGCCCT 39336 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT---CGGACTGA 24936 |||| ||||| |||||||| |||||||| | | | | || ||| | ||| ||| Sbjct 39335 TCAACATCGCCAGCTACGCCCTGCTGACGC---TGATGGTGGCGCAGGTCTGCGGCCTGC 39279 Query 24937 AGGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGC 24996 || ||||| ||||||||||||||||| ||| ||||||||| | |||||| |||||| Sbjct 39278 AGCCGGGCGAGTTCATCTGGACCGGCGGTGACTGCCACCTGTACGCCAACCACATCGAGC 39219 Query 24997 AG 24998 || Sbjct 39218 AG 39217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163821420545728