Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq38288 203 4e-47 seq18050 183 4e-41 seq4663 170 2e-37 seq77092 113 5e-20 seq5663 100 3e-16 >seq38288 Length=11396 Score = 203 bits (224), Expect = 4e-47 Identities = 367/535 (69%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 37164 TTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTA 37223 || ||||| ||| |||||||| || |||| |||||||||| ||| ||||| | || Sbjct 7659 TTGAACAAGTGACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTG 7718 Query 37224 GAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT 37283 ||| |||||||| |||||||| | | ||| || | |||||| || || | ||| || Sbjct 7719 CTAAACGTTAATCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAA 7778 Query 37284 CCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA 37343 || || || || || ||||| || || ||||| || || | ||| | | |||| || | Sbjct 7779 CCTGAGAAAAAGATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGATGGA 7838 Query 37344 CTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTT 37403 | | ||||| ||| || ||| ||||||||| |||| || || ||| Sbjct 7839 TTTTGT------ATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTT 7892 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATC--AATTA 37461 ||||| || || || | |||||||||| | |||| | || || ||| ||| | Sbjct 7893 TCAATGGCGTTAAACAATTTATTTTTTTCTTGATGATCTC--AAATGAGGATCTCAATCA 7950 Query 37462 GTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521 | || || |||||||| || || ||||||||||| || |||||||| |||||||| || | Sbjct 7951 GCAAGCTGTACATTTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAAC 8010 Query 37522 TAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 | |||| | | || || ||| | || | | |||| |||||| | || || | Sbjct 8011 GAACTTCGGTCACTTTGACTTCGCGAGCGAAGCGTTCCACTAAATTTTCAATTACAATAC 8070 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATA 37641 ||||||| || ||||| || || ||||||| | |||||| | || ||| | || Sbjct 8071 CATCACTGGCGGCAAAAAAGGCCAGAACATGGGAAAGAAAATGCCATTTATCGGGGGTTA 8130 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 || ||| |||||| |||||| || ||||| ||||| || | ||||| || Sbjct 8131 ATCTTTCCCAATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGAA 8185 >seq18050 Length=32055 Score = 183 bits (202), Expect = 4e-41 Identities = 528/804 (66%), Gaps = 15/804 (2%) Strand=Plus/Plus Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 ||| || ||||| || || ||| ||| ||| |||| || |||||||| | ||| Sbjct 11575 TTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTGGTTTTTCCTTCCAAACTAATACA 11634 Query 36944 TTCCATAAAA-TCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCA 37002 ||||| |||| ||||| || || | |||| || || ||| |||||| || Sbjct 11635 TTCCAAAAAAATCAAAAGGGTTTTCCACAATATAAATTTTATCACACCCCAATTCCCACA 11694 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 | | || || |||||||| || |||| || | | | | || || ||||| | Sbjct 11695 ATAATCGGTCTGCCACAAATTCAATATATTGCTTTATCAATGTACAATTCATGCCAATGA 11754 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTA 37122 | |||||| | ||| || | |||| || || || |||| |||| | | Sbjct 11755 GGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCTCAATCGTTACGGCATACGATATAA 11814 Query 37123 TATTAACAATA-ACTTCTTCAGTTGGGGGATATTTTA---AATATTTAAACAATAAACAT 37178 | | ||||| | | ||| || || | ||||| ||| || ||||| ||| Sbjct 11815 TTTGCACAATTTAATGCTT-AGATGATTTGTTTTTTACGTAATGATTGAACAAGTGACAG 11873 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 | |||||| || |||| |||||||||| ||| ||||| || || ||| ||||||| Sbjct 11874 GAAAAATCGCAGTGTAGCCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCAA 11933 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 |||||||| || | ||| || | |||||| || || ||||| || || || || | || Sbjct 11934 GGCATTAATCCCCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCTGAGAAAAGGATT 11993 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 ||||| || || ||||| || || || ||| | |||| | | | ||| Sbjct 11994 CCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGGAAAAGACGGGTTTTGT------ATC 12047 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418 || ||| || ||| ||||||||| ||||| || || |||||||| || || || Sbjct 12048 CAATTTAATGACCATTCTGCCTTTTTCTTAACGCAGGAAAGGGTTTCAATGGCGTTAAAC 12107 Query 37419 AGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 | |||||||||| | |||| | || ||||| | || || |||||||| Sbjct 12108 AATGTATTTTTTTCTTGATGATCTCGAACGAGGGTCTCAATCAACAAGCTGTACATTTCT 12167 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT-AATTG 37537 || |||||||||||||| || |||||||| ||||||| || | ||| || ||| | || Sbjct 12168 GAATGAATATTTTCAATGGCAATCTGAAAGTCATAAAAGCAACGAGCCTC-GATCACTTT 12226 Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597 || || | ||| | | |||| |||||||| || || || ||||| || ||||| Sbjct 12227 TACTTCACGAGCAAAGCGTTCCACTAAATTTTCATTTACAATACCTTCACTGGCGGCAAA 12286 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATT 37657 || || | ||||| | |||| | | |||||| | |||| ||||||||| | Sbjct 12287 -AAGGCCAAAACATGAGAAAGAAAACGCCGTTCATCGGGGGTTAATCTTTTCCAATATCT 12345 Query 37658 AATATCTTTTGATAAATCAACTTC 37681 | |||||| || |||| ||||| Sbjct 12346 TACATCTTTGGACAAATTCACTTC 12369 >seq4663 Length=104512 Score = 170 bits (188), Expect = 2e-37 Identities = 556/849 (65%), Gaps = 46/849 (5%) Strand=Plus/Plus Query 36906 CTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTA 36965 || || || || || ||||| ||| ||| |||||||||||||||||||| || || || Sbjct 34252 CTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAGGGTTG 34311 Query 36966 GATGTATTATATATAGTACTAC-ATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024 | ||| ||||| ||| | || | || || | | || | || || || | |||||| Sbjct 34312 GCTGTGTTATA-ATATTTCTCCAATCCCAAATTAATAAGCAATCTGTCAGCCATAAATTC 34370 Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAA---TTGCATC 37081 || || | |||||||| || | | || || | || || |||||||| | || || | Sbjct 34371 AATATACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTAAGCTTACA-C 34429 Query 37082 TTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTC 37141 || | |||| || |||||| || |||| ||||||||||||| | || Sbjct 34430 TT--AAAAATTATTGTTCTATGATGACAGATTCTTTAACTATATCGAGTAT--------- 34478 Query 37142 AGTTGGGGGA--TATT--TTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAAC 37197 || || || | || |||||||||| | ||||||||||||||| || | | Sbjct 34479 -GTAAGGAGACTTGTTAATTAAATATTTGTTAAGGTGACATGCAAAATCACAGTGAAGTC 34537 Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| | ||||||| | ||||| | || | || | Sbjct 34538 CTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCACGATTCT 34597 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| || |||| ||||| | || |||||||| || ||||| || ||||||| Sbjct 34598 TCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAGCAAATG 34657 Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAG------AAATCCAtttttttGTCC 37371 |||| | ||| || | | || || | || | |||||||| | || Sbjct 34658 CTACTACACGAGT-------GGTAAATTAGATTCCGGGTATTGTATCCATTTCAAAGCCC 34710 Query 37372 AATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGt-ttttt 37430 | || || || |||| ||| ||||| ||| | ||||| || || | || Sbjct 34711 AGTCAGCTTTCTTCTTAATGCATGGTATTGTGGTAATAAC-ATTAAGCAAATGTGTCTTC 34769 Query 37431 tCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTT 37490 | || ||| || ||||||| ||| ||||||| | |||||| || | || ||||| Sbjct 34770 TGATCCTGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTATGGATATTC 34829 Query 37491 TCAATAGCTATCTGAAAACCATAAAAACACCTAGC-TTCAG-ATAATTGAACATCGTTAA 37548 || || |||| || || |||||||| || | || || || | ||| || || ||| Sbjct 34830 TCTATTGCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAAT--CACTTCAGTAA 34887 Query 37549 AAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGC-AAAGAAAGCAAGA 37607 ||| || | | | | | |||| || || ||||| | || ||| |||||||| Sbjct 34888 TAAATCTTTCTACAAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAAAAAGCAAGG 34947 Query 37608 ACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTT 37667 | | | ||||||| ||| || | || | | | |||||||| |||| | Sbjct 34948 ATGTTTGAAATAAAATATCTCTCGTTATCAGTCAGAGTAGACCAATCATGTCTATCAGCT 35007 Query 37668 GATAAATCAACTTCATCAACGGTCCAAAA--ACTTGCCAATGCACGTTTATACATCGTCC 37725 |||| ||||||||| ||||| ||||| || | | || || |||||||||| || Sbjct 35008 GATAGATCAACTTCTTCAACTGTCCAGAATGAACTCTCA--GCCTTTTTATACATCTGCC 35065 Query 37726 AAATATCAT 37734 | ||||||| Sbjct 35066 ATATATCAT 35074 >seq77092 Length=4929 Score = 113 bits (124), Expect = 5e-20 Identities = 183/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||||||||| |||| |||||||||| ||| |||||||| || ||| |||||||| Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 |||||||| || | ||| || | || ||| || || ||||| | | || || || || Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 ||||| || || ||||| || || ||| | | |||| || | | | ||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAAAGATGGATTTT------GTATC 102 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418 || ||| || ||| ||||||||| ||||| | || |||||||| || || || Sbjct 101 CAATTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAAC 42 Query 37419 AGAAAGtttttttCTTCACTATCT 37442 | | |||||||||| | |||| Sbjct 41 AATATATTTTTTTCTTGATGATCT 18 >seq5663 Length=92856 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 37563 AAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAA 37622 ||||||||||| || || |||||||| || ||||| || || | || || |||||| Sbjct 71992 AAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGATAAAA 71933 Query 37623 TGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 37682 || |||| || | |||||||| |||||| | | |||||||||||| |||||||| Sbjct 71932 TGCTTTTCTTCCGGTTTTAATTTTTCCCAATCTATCAGATCTTTTGATAAGTCAACTTCT 71873 Query 37683 TCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGT 37742 ||| | |||||||| ||| || || ||||| ||| || || | || | Sbjct 71872 TCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATACTCA 71813 Query 37743 ATTGGAAATATTACAAATCT 37762 || |||||||| ||||| || Sbjct 71812 ATAGGAAATATGACAAACCT 71793 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 37438 TATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAG 37497 ||||| | ||||||||||| || || | || ||||||||||| || | ||||||||| | Sbjct 73659 TATCTTTAATATAAGTATCTATAAGAAGGCTGTACATTTCAGAATGTACATTTTCAATGG 73600 Query 37498 CTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543 | || || || |||||||||||||| ||||||| | |||||| || Sbjct 73599 CGATTTGGAACCCATAAAAACACCTTGCTTCAGTCACTTGAACTTC 73554 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| ||||| | ||||| || || || || ||||| |||||||| || || Sbjct 79464 TCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCTTC 79405 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| || || | |||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 79404 AACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATGCA 79345 Query 37320 AC 37321 || Sbjct 79344 AC 79343 Score = 93.3 bits (102), Expect = 5e-14 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 36828 TAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATT-CATAACTCCCATTTT 36886 ||||||||| |||| || ||||| || ||| || || | ||||||||| || Sbjct 86207 TAAAAATCTGCATCCAAGGTAAAGCA-ATGATCTTCTTTCTTTGACATAACTCCGCACTT 86149 Query 36887 TTGATATTCTCCAACTCGTCTTT-CGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTT 36945 ||||||||| ||||| | ||||| |||| |||||||| |||||||| || ||||| | Sbjct 86148 TTGATATTCACCAAC-CTTCTTTTCGAAGAAATTTGTTTTTCCTTCAAGACTTATATGCT 86090 Query 36946 CCATAAAATCAAATGGATT 36964 ||||||||||||| ||||| Sbjct 86089 CCATAAAATCAAAGGGATT 86071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590982339865440