Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6372 105 5e-18 >seq6372 Length=86001 Score = 105 bits (116), Expect = 5e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 29854 AACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTG 29913 ||||| ||||| | || ||| ||| || |||| ||| ||| || || | ||||||| Sbjct 39266 AACTCGCCCGGCTGCAGGCCGCAGACCTGCGCCACCATCAGCGTCAGCAGGGCGTAGCTG 39325 Query 29914 GCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAG 29973 |||||||| ||||| || ||||| |||||| |||| | |||||||||||| || || Sbjct 39326 GCGATGTTGAAGGGCACGCCGAGGAAGATGTCCGCCGAGCGCTGGTAGAGCTGGCAGGAC 39385 Query 29974 AGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 |||| |||||| ||||| ||||| ||| | || || || || || ||||| Sbjct 39386 AGCTTGCCGTCGGCGACGTAGAACTGGAACAGCGCATGACAGGGCGGCAGCGCCAT 39441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407720019853628