Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq96199 147 2e-30 seq5 147 2e-30 >seq96199 Length=2664 Score = 147 bits (162), Expect = 2e-30 Identities = 275/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 45160 GTATAATGTATCTCCCAAAATAGAGAACTGATGAGTGTGCATACATGGACGTAAGCAACC 45219 |||||| ||||| ||||| | ||| || || ||||||||||| || ||||| ||||| Sbjct 2283 GTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGCATACAAGGGCGTAAACAACC 2224 Query 45220 TTTCGAGAACTCTCCAGGATTCCAGAAGGTTAGAATTTCCCCACGATCATCAATGCCCTT 45279 | | || || || ||||| | || || | ||||| || ||||||||||| || || Sbjct 2223 TAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCACCGCGATCATCAATTCCTTT 2164 Query 45280 CTTCAGGTTAT-GATAAATCTTGGCTAGTTGGTCAAACATAAGACCATC-GGAATTAGTC 45337 | | ||||| ||||| | || || || |||| |||||| || | | | Sbjct 2163 CGATAAGTTATCGATAACTTTTTTA-AGCTGATCAAGGTGGCTACCATCAGGGCGTTGCC 2105 Query 45338 CACTGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTCACCTTTGCGATATGGA 45397 |||| || |||||||||||||| || || ||||||||||||||||| | |||| ||| Sbjct 2104 AACTG-CGCCCTTGAACACCATACACACGGCCCATATCATCCTCACCACTACGATGCGGA 2046 Query 45398 TTGTCTAGCCAAGCTAAGTTTTCATTTGCATTAGCATTCCATGTGTTAACACCAATAGCG 45457 || || ||||| ||| ||| || || || || |||||||| || || || ||| | Sbjct 2045 TTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATATCA 1986 Query 45458 CGGAATTGTGCTGCTGAATCATACCCACGCAGATACCCAATCATTTCCATTATTGCTTGT 45517 || || ||||| || || || ||||| | ||| || | | ||| ||| || | Sbjct 1985 CGAAACTGTGCAGCGCTGTCGTAACCACGTAAATAACCCAGTAACTCCGCTATCGC-CGC 1927 Query 45518 TTTGCAAACGC-CTTACGAGTAGTAATAAGGGGGAA 45552 |||| ||| || ||| || || || || || || || Sbjct 1926 TTTGTAAAAGCTCTTTCGCGTGGTGATGAGCGGAAA 1891 >seq5 Length=869209 Score = 147 bits (162), Expect = 2e-30 Identities = 235/330 (71%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 45146 TGAAAAGAGTTCAGGTATAATGTATCTCCCAAAATAGAGAACTGATGAGTGTGCATACAT 45205 ||| |||| |||| || | ||||||||| | | || ||| || |||||||| Sbjct 100404 TGATAAGACGTCAGATACAGCTTATCTCCCAGTAAACTAAAGGTATGGGTATGCATACAG 100345 Query 45206 GGACGTAAGCAACCT--TTCGAGAACTCTCCAGGATTCCAGAAGGTTAGAATTTCCCCAC 45263 || || | ||||| ||| | |||| ||||| || | ||||| || || || ||| Sbjct 100344 GGCCGCAGACAACCAAGTTCAA--ACTCACCAGGGTTATAAAAGGTCAGGATCTCGGCAC 100287 Query 45264 GATCATCAATGCCCTTCTTCAGGTTA-TGATAAATCTTGGCTAGTTGGTC-AAACATAAG 45321 |||| || || ||||| ||||||| ||| | | ||| | ||||| || ||| | || Sbjct 100286 GATCGTCGATCCCCTTGCTCAGGTTGCTGACGATTTTTGCC-AGTTGATCTAAAGTTGAG 100228 Query 45322 ACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTC 45381 ||||||| || ||| | || ||||| |||||||| || || ||||||||||| || Sbjct 100227 -CCATCGGGCTTCTGCCAACGCCGGCCTTGCACACCATATACCCGGCCCATATCATCTTC 100169 Query 45382 ACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATTAGCATTCCATGT 45441 ||| || |||| || || |||| ||| || ||||| || ||||| |||||||| || Sbjct 100168 ACCCTTACGATGCGGGTTATCTAACCAGGCCTGATTTTCGTTGGCATTCGCATTCCAGGT 100109 Query 45442 GTTAACACCAATAGCGCGGAATTGTGCTGC 45471 ||| ||| ||||| ||||||||||| || Sbjct 100108 ATTACAACCGATAGCACGGAATTGTGCGGC 100079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347439924195944