Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq5 159 3e-34 seq5373 86.0 6e-12 >seq5 Length=869209 Score = 159 bits (176), Expect = 3e-34 Identities = 477/725 (66%), Gaps = 31/725 (4%) Strand=Plus/Minus Query 119159 CGAGGTGGCTCAAAACCATTCGTGGAGTTAGTGATCTGGCTGGATGTCTCGCAAGGCATC 119218 || || ||||| | |||||| || | || | |||||| || ||||| | |||||| Sbjct 712059 CGCGGCGGCTCGATACCATTAGTCGCATTCGAGATCTGCGATGAGGTCTCAGATGGCATC 712000 Query 119219 ATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATCGCGATATCGACACGCAGCTTTTCC 119278 | || || | ||| |||||||||||||||| | ||||| |||||||| ||| Sbjct 711999 AGCGCTGATAACGTTGAGTTACGCAGGCCATACTGCTGAATATCTTTACGCAGCTGCTCC 711940 Query 119279 CAGTCCATCT-TCAG--TTCCGCAGTGTGGAGAGC--ATCCACCTCTTTTTTGTAACGGT 119333 || |||| | | || ||| ||| | | | ||||| || ||||| || | Sbjct 711939 CAATCCAGTTGTAAGGCTTCAGCAC-----AAACCTTATCCAGATCCTTTTTATAGGTAT 711885 Query 119334 CGATCGGCAGAATGCCCTGAGAGTAAGTTGTCTCGTGGAAGAGATCACATTTGCCCAGTT 119393 | ||||||||||| ||||| | ||||| || |||| || ||| ||| ||| Sbjct 711884 CAATCGGCAGAATACCCTGCGCATAAGTGGTTTCGTTAAACTTCGGACAAGGGCCTTGTT 711825 Query 119394 CTTTTGCCAGGTCAACCGACGCTTCCAGTAGGTAATACTGGAATGCTTC--AGCCA-GTT 119450 | | ||||| | ||||| |||| ||| || || ||||| | |||||| || | | | Sbjct 711824 CCTGCGCCAGTTTCACCGAGGCTTTCAGCAGATAGTACTGCATTGCTTCGAAGGTACGGT 711765 Query 119451 CGTGAACAGCGTTAGCTGCACGAGGGTCGCTGTACTTCATCCCGCGCTTCGCCAGGTAGT 119510 | | || || || | | | || ||| || | || ||||||||||||||| Sbjct 711764 GGGTCAGGGCATTGGCCGAGCCA---TCCGAGTATTTGACGCCATGCTTCGCCAGGTAGT 711708 Query 119511 ACGCGAGGTTGGTCCAGCCAATCCCCAGTGTACGGCGCAGCTTGGT--CTTCTCT-GCCG 119567 | ||| ||| || ||||| ||||| ||||| ||| | | | || | || | Sbjct 711707 AGGCGTAGTTAATCACACCAATGCCCAGAGTACGACGCGCCATAGAACCTGATTGAGCAG 711648 Query 119568 CCAGAACCGGGTAGTTCTGATAGTCCAGCAGTCGGTCCAGAGCACGAACCAGTGTA-CGG 119626 || ||| ||||| | |||||| |||||||| | ||||| || || ||| | | | | Sbjct 711647 CCGGAATAGGGTAATCCTGATAATCCAGCAGGCTATCCAGTGCCCGCACCGCTAAATCTG 711588 Query 119627 ACAG--GCTCACGCATGTCTTCCAGCTTCTCGATCTTGCCAAGGTTAATGGCAGACAGAG 119684 ||| | ||| | || ||||||| || || ||| ||||||| ||| ||||| | Sbjct 711587 CCAGCGGTTCAAAC---TCGTCCAGCTGTTCAATGGCGCCGAGGTTAAAGGCTGACAGTG 711531 Query 119685 TACACAGGGCTACCTCGCCCGGGTCTTCTGGATCGTTAATGTCGTTGATCGGATGCGTCG 119744 | || || || | ||| || | |||||| |||| | | | ||| | |||| Sbjct 711530 TGCAGAGCGCAATCTCACCG------TTTGGATCATTAACATGCTCCAGCGGTTTGGTCG 711477 Query 119745 GCAGCGCGATCTCCATACACAGGTTGGACTGCTTCACCGGGGCCTGTTTAGGGTCAAACG 119804 ||| ||| || |||| |||||||||| ||| ||||| ||| | |||| ||||| Sbjct 711476 GCAACGCAATTTCCAGACACAGGTTGCTTTGCCGTACCGGTGCCAGCGCCGGGTTAAACG 711417 Query 119805 GGCTGTTGGTATTACAGTGGTCAACGTGCTGAACATAAATACGACCAGTTTGTGAACGCT 119864 |||||| ||||| ||||| || |||| || | ||||| || || || | |||| Sbjct 711416 GGCTGTGCGTATTGCAGTGATCGACGTTTTGCAGGTAAATGCGGCCGGTACTGGCGCGCT 711357 Query 119865 CCTGC 119869 ||||| Sbjct 711356 CCTGC 711352 Score = 147 bits (162), Expect = 2e-30 Identities = 245/354 (69%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 118114 CATGATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTA 118173 ||| || ||||| |||| | ||| || || ||| |||||||| ||||||||||| Sbjct 712924 CATAATATCGTCGAAGATCTTATGCGGTTCAGCACTGATATTACGGATAATATGGGTGTA 712865 Query 118174 TGAGCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCGACCCATGTTTCCAGGGTTGT 118233 ||| ||| || || ||||| || ||||| || || | ||| |||||||| | Sbjct 712864 GCTGCGGCTGTGAATGGTTTCACTAAAGGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGG 712805 Query 118234 GTCGGACACGATCGGGAGCAGAACTGCATTCGGCCCACGGCCCTGTACAGAATCCAGAAG 118293 ||||| ||||| | ||| | | |||||| || ||||| || || ||||| || Sbjct 712804 AATAGACACAATCGGCAACAGGGCGACGTTCGGCGAGCGACCCTGCACTGAGTCCAGCAG 712745 Query 118294 GATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTA 118353 ||||||| ||||| |||||||| ||||| || || || || || || | | | | | Sbjct 712744 CGTCTGGTATTTCAGATTGCTGATAAAGATATGTTTTTCATGCTCAGGTAATTGCTGGAA 712685 Query 118354 GTCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTT 118413 || || || || | |||| || |||||||| |||||||| || ||| ||||| Sbjct 712684 ATCAATCCGATCTTTACTGACGTCAATCTCTTCCGGCCGCCAGAAAAAGCTCAGCTGCTT 712625 Query 118414 CTCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTT 118467 ||||||||||| || || | | | || ||||| ||||| || || ||||| Sbjct 712624 TTCGATCAGCTTTTCAAAAATCGGATACTTTTGCTGATCATAACGGGAGACGTT 712571 Score = 118 bits (130), Expect = 1e-21 Identities = 347/525 (66%), Gaps = 25/525 (5%) Strand=Plus/Minus Query 117481 ATCAACCTGGCCGGACAGATACTGACCGTTCTCGGTTTCCTGCGGTGTTACCTGCACATT 117540 ||||| |||||| |||||| | | |||| | ||||||||| | ||||||||||| Sbjct 713587 ATCAATCTGGCCCACCAGATAGGAGCTGATCTCAGATTCCTGCGGCGCCACCTGCACATT 713528 Query 117541 CCCGGTATTCAGGTGGCTGTTGATCCAAGGGATTGGGTTCTTGGTCGGTTTCCCGATCAG 117600 | | ||| | | |||||||| || || ||||| | ||| | | | | | Sbjct 713527 GTCAGACACCAGCCAGGTATTGATCCACGGAATGGGGTTTTGGGTGG---TAGCAAAGCG 713471 Query 117601 TTCACCAAGGCCAACCGCCCGCATACGTTGATCTGTGATGTAGTCGATGTAACCGTC-CA 117659 | | ||| |||||| |||| || || || || || || | || | | | || Sbjct 713470 TGGTTTTAAGCCGACCGCCTGCATTCGGCTATTGGTAATATACTCAACATA-CTGACACA 713412 Query 117660 GCATACCTTTGTTCAGACCGATCATCGAACCGTCTTTGAACAGGAAG-CTGCCCCAGTCT 117718 | ||| |||||||||| || |||||||| || ||||| ||||| || |||||| |||| Sbjct 713411 GAATATCTTTGTTCAGGCCAATCATCGAGCCATCTTTAAACAGATAGGCTGCCC-AGTCC 713353 Query 117719 TTCTCCTGCACCGATGCGTCGATAAAGCCCTGTCGT--GCCTCTTCGTAGCAATCCTCTG 117776 || || ||| ||| ||| |||||| || ||| | || || | ||| || | | Sbjct 713352 TTTTCTTGCTCCGCCGCGCGCATAAAGA--TGGCGTAAGATTCCTCTTCGCACTCTTTGG 713295 Query 117777 CCACACGAGCAAA---CAGATCACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATACT 117833 | | || | | ||||| | || |||| | || |||||||||| || Sbjct 713294 CAATTTCCGCCATTTCCGGATCATCATC---ACCGCTGGCCAGAATATTCAGCATATGCT 713238 Query 117834 GAGTGCCGGACAAATGCAAGGCTTCATCACGGGCAATCAGTTCAATAATGTTGGTGTTGC 117893 ||||||||| | || | |||||||| ||||||||||| ||||| || | || | Sbjct 713237 GAGTGCCGGTGAGGTGTAGCGCTTCATCGCGGGCAATCAGCCGGATAATCTTAGCATTCC 713178 Query 117894 CCAGCATTACCCCGCGCTCGCCGAACGCAAATGAGCAGGCGAAGCTCACGTAGAAGCGGA 117953 | ||| | | | ||||| | || ||||| |||||| ||||| || || ||||||| Sbjct 713177 CTTCCATCAGCTCACGCTCAGCAAAAGCAAAACTGCAGGCAAAGCTGACATAAAAGCGGA 713118 Query 117954 TCGCTTCCAGTGCGTT----GATATTGTGCAGGCACAGGTACAGC 117994 ||||||| | | |||| || ||| | ||||||||| ||| Sbjct 713117 TCGCTTCTAATACGTTTACCGACATT----AAGCACAGGTAAAGC 713077 Score = 96.9 bits (106), Expect = 3e-15 Identities = 236/348 (68%), Gaps = 20/348 (6%) Strand=Plus/Minus Query 120386 TCACCAGACTCAATCAGTACGCAAGAGCTAAACTGACGGGTCGGGGTACGAACACCCGCC 120445 |||||| |||||||||||||||| ||||| ||||||||||| |||||||| || |||| | Sbjct 710838 TCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGAC 710779 Query 120446 ATGATCGGGGTCGGTAAAGACACCTTCATCAGCGATACGT----TC-TCGTACAGGTCAA 120500 || || || ||||| | || | ||| | ||||| |||| || | | | || | Sbjct 710778 ATAATAGGTGTCGGCAGTGAAATCTTAAACAGCG--ACGTCGCATCATAGAAGCGGCGCA 710721 Query 120501 CAATACGTTCCAGACGGGT-CTTTTTGTCTTCCTGTGA---CAACAGGCCCATTGCAATC 120556 | ||| ||||| ||||| || || | | || | ||||||| |||| | Sbjct 710720 C-ATA--GTCCAGCCGGGTGCTCTTCGGGTAATTGGCAAATAAACAGGC----GGCAACC 710668 Query 120557 AGCAT-CAGCGCCATCTGAGGGGATTCATAAATCTCCCCGGTGACGCGGTGCTTGACCAG 120615 ||||| || | | ||| | | |||||||||||| ||||| || |||| | ||||| Sbjct 710667 AGCATATAGAG-GAACTGGGCGCTTTCATAAATCTCACCGGTTACCCGGTTTTGTACCAG 710609 Query 120616 GTACTTGTCTTCGTACTGACGCATTGCTGCGTAAGTGTAATCGAAGTCGCGGTCGTGAAC 120675 || || |||| |||| | || || ||| || ||| | |||||| || | Sbjct 710608 ATATTTACCTTCCAACTGCTTAACGGCAGCATAACTGAAATTCAGATCGCGGCTATGGTC 710549 Query 120676 GATCTTGTCATTCAGGAAAGCAATCTCATCACGGGTGTAATCGTCCAG 120723 ||| | | ||||||| | | | ||| || ||| ||||||| |||| Sbjct 710548 GATATAGCTGTTCAGGATATCCAGCTCTTCGCGGCTGTAATCAGCCAG 710501 >seq5373 Length=95907 Score = 86.0 bits (94), Expect = 6e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 146803 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAG 146862 ||| | ||||| ||||||||||| ||| ||||||||||||||| |||||| ||||||| Sbjct 61963 CGGAGCATAGCACAGCCTGGTAGTGCACCTGGTTTGGGACCAGGGGGTCGTAGGTTCGAA 61904 Query 146863 TCCAGCTACACCGACCAAATTATTG 146887 ||| || | ||||||| |||||| Sbjct 61903 TCCTACTGCTCCGACCATTTTATTG 61879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476469713640480