Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_017975.1 Length=167292 Score E Sequences producing significant alignments: (Bits) Value seq5 122 9e-23 seq96199 89.7 5e-13 >seq5 Length=869209 Score = 122 bits (134), Expect = 9e-23 Identities = 218/315 (69%), Gaps = 10/315 (3%) Strand=Plus/Minus Query 97116 CACCATATACATAACCCATATCATCTTCGCCGCGACGAGACTCGTTAGCTAACCACGCTT 97175 |||||||||| |||||||||||||| || |||| | |||| ||||||| || | Sbjct 100196 CACCATATACCCGGCCCATATCATCTTCACCCTTACGATGCGGGTTATCTAACCAGGCCT 100137 Query 97176 CATTTAAGTTAGCATTAGCATCCCAAGTTTTAGTTCCTAACTTACGGAAGTCTTCTGCGT 97235 |||| ||| ||||| |||| ||| || ||| || | |||||| || |||| Sbjct 100136 GATTTTCGTTGGCATTCGCATTCCAGGTATTACAACCGATAGCACGGAA---TTGTGCGG 100080 Query 97236 TAGTG---TAACCACGAATGTAACCTAGTAGTTCGGCTACGGCTGCTTTCCAATAACTCT 97292 | || ||||| | | ||| |||| | ||| || | |||||||| ||||||| | Sbjct 100079 CACTGTCATAACCCCTTAAGTATCCTAACAATTCAGCAATCGCTGCTTTGTAATAACTTT 100020 Query 97293 TACGTGTAGTAAGCATCGGTAGT--ATACCTGCTTCAACATCATATTCCATGTTAGCACG 97350 ||||||| || |||| ||| | | || ||| ||||||||||||||| | |||| Sbjct 100019 TACGTGTCGTCAGCAGCGGGAATTGATTATTGC--CAACATCATATTCCAGATCAGCATT 99962 Query 97351 TATAACAGTTAGGCAACGTTTACCTGTACGTTCATTATATACCCATTCACCTTCTTCTAC 97410 || || || || || || |||| ||||| |||| | ||||| ||||| || || Sbjct 99961 AATGACTGTCAGACAGCGGGTACCGGTACGGGCATTCTCAACCCAGATGCCTTCATCAAC 99902 Query 97411 AATACGACGACCTAA 97425 ||| || ||| ||| Sbjct 99901 AATTCGCTGACATAA 99887 >seq96199 Length=2664 Score = 89.7 bits (98), Expect = 5e-13 Identities = 222/335 (66%), Gaps = 14/335 (4%) Strand=Plus/Minus Query 97116 CACCATATACATAACCCATATCATCTTCGCCGCGACGAGACTCGTTAGCTAACCACGCTT 97175 ||||||| ||| ||||||||||| || || | |||| | || | | |||||||| Sbjct 2089 CACCATACACACGGCCCATATCATCCTCACCACTACGATGCGGATTTTCAAGCCACGCTT 2030 Query 97176 CATTTAAGTTAGCATTAGCATCCCAAGTTTTAGTTCCTAACTTACGGAAGTCTTCTGCGT 97235 || ||| || || |||| |||||| || || | | ||| || | | | ||| Sbjct 2029 TGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATATCACGAAACTGTGCAGCGC 1970 Query 97236 TAGTGTAACCACGAATGTAACCTAGTAGTTCGGCTACGGCTGCTTTCCAATAACTCTTAC 97295 | ||||||||| | ||||| |||| || |||| || ||||| || | ||||| | Sbjct 1969 TGTCGTAACCACGTAAATAACCCAGTAACTCCGCTATCGCCGCTTTGTAAAAGCTCTTTC 1910 Query 97296 GTGTAGTAAGCATCGGTAGTATACCTG----CTTCAACATCATATTCCATGTTAGCACGT 97351 | || || | | ||| | || || | | ||||||||||| | | ||| Sbjct 1909 GCGTGGTGATGAGCGG----AAACTTGTTATTTGCCACATCATATTCAAGATCGGCATTA 1854 Query 97352 ATAACAGTTAGGCAACGTT---TACCTGTACGTTCATTATATACCCATTCACCTTCTTCT 97408 || || |||| ||| || | ||||| |||| || | ||||| ||||||| || Sbjct 1853 ATTACGGTTA---AACATTTGGTTCCTGTGCGTTTGTTCTCAACCCACACACCTTCGTCA 1797 Query 97409 ACAATACGACGACCTAAGTCTAAATAAGATTTCAT 97443 |||||||| ||| ||| |||||||| |||||| Sbjct 1796 ACAATACGCTGACATAAATCTAAATACTGTTTCAT 1762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534000606741120