Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq1110 102 9e-17 seq101083 98.7 1e-15 seq19112 98.7 1e-15 seq76955 82.4 8e-11 >seq1110 Length=205023 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| Sbjct 34534 TGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAACC 34475 Query 76005 AATTGAGCTAAAGGCCCAAAA 76025 || ||||||| |||||| ||| Sbjct 34474 AACTGAGCTATAGGCCCTAAA 34454 Score = 91.5 bits (100), Expect = 2e-13 Identities = 193/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 11062 TTATTCCATACTTCAAATTGTTCTGCTGCGCCTTTATAATCGCCAGCATTCAATTTTCTC 11121 |||||||| || |||||||||| ||||| || ||| || || ||| | | | Sbjct 28657 TTATTCCAAACCCCAAATTGTTCGGCTGCTGCTGAATATTCACCCATATTTAGATACTTT 28598 Query 11122 AATAAAGTTGAATTCGCAAATGCCGTTTCGCCAATATTGTACATTAATGAAACTAAAGCA 11181 ||||| ||||| | |||||| |||| ||||| || || | ||||| || | ||| Sbjct 28597 AATAATGTTGATGTTCTAAATGCATTTTCACCAATGTTATAAGTCAATGATACAAGGGCA 28538 Query 11182 TCAAATTGATTTTGATTTAATGGTACAGTAACTAACTTATTAACAGCAGATACAAATACT 11241 || || |||||||| ||||||| ||| |||| | || ||| || | | ||| | Sbjct 28537 TCGAACTGATTTTGCTTTAATGAAACATTAACAAGCTGATTTACTGTACGCTGAAACCTT 28478 Query 11242 TTTAAATCATTTTTCATATACATTTTAGCCTGGGCTTCGGTGCATACATCGCCTTTGGTA 11301 |||||||| || | ||| ||| || | ||| ||||| || ||| | || Sbjct 28477 AATAAATCATGTTGAAAATAAGCTTTTGCTTCACTTTCAGTGCAGGTCTCACCTCTTTTA 28418 Query 11302 ACACGTTTACCACTTGGATATTTAATTGTCCCGTATCCAATAGTCCAA 11349 || | ||| ||||||| | |||| || ||||||||||||||| Sbjct 28417 ACTCTCACTCCATTTGGATAAATCGTTGTTCCATATCCAATAGTCCAA 28370 >seq101083 Length=2117 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| Sbjct 2040 TGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAACC 2099 Query 76005 AATTGAGCTAAAGGCCC 76021 || ||||||| |||||| Sbjct 2100 AACTGAGCTATAGGCCC 2116 >seq19112 Length=29680 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 ||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| Sbjct 3357 TGGTGGGCCCACCGTGACTTGAACACGGGACCAACGGATTATGAGTCCGCTGCTCTAACC 3298 Query 76005 AATTGAGCTAAAGGCCC 76021 || ||||||| |||||| Sbjct 3297 AACTGAGCTATAGGCCC 3281 >seq76955 Length=4939 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 75945 TGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTAACC 76004 |||||| || ||||||||||||||||| ||| | ||||||||||| |||||||||| Sbjct 825 TGGTGGCCCCTCCCAGACTTGAACTGGGGACCTAACGATTATGAGTCGTGTGCTCTAACC 766 Query 76005 AATTGAGCTAAAGGCCCA 76022 || |||||||| || ||| Sbjct 765 AACTGAGCTAAGGGGCCA 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532068968452320