Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq379 114 5e-21 seq1 87.8 7e-13 >seq379 Length=288837 Score = 114 bits (126), Expect = 5e-21 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 6585 CTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTGCTGTTCATC 6644 |||||| || |||||||||| || | |||| ||||| || || ||| | |||||| Sbjct 226846 CTGTGGAACAAGATCATGCGCAACACTTATGATTTCGCGGAACCCGGTGTGATCTTCATC 226787 Query 6645 GACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAACCCC 6704 ||| |||||| |||||||| || | || || ||||||||||||||||||||| Sbjct 226786 GACCGCATCAACAAGATGAACAATCTGGGTTATGTGGAAACCATCGCCGCCACCAACCCC 226727 Query 6705 TGCGGTGAGCAACCCCTCCCGCCCTACGGTGCCTGTCTCCTGGGCTCCTTCAACCT 6760 || || || || || || |||||||| || ||||| || ||||| || |||| || Sbjct 226726 TGTGGGGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTGCTGGGGTCGGTCAATCT 226671 >seq1 Length=1655743 Score = 87.8 bits (96), Expect = 7e-13 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 4997 CGAGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAGCAGATGGGGGAGGA 5056 ||| ||| |||| ||||| | || ||| || ||| | | |||| |||||| | || Sbjct 176643 CGACGCCCGGCTGATCGTGCTCGACGAGGTGTCGATGGTCGGCGAGGAGATGGCGCGCGA 176584 Query 5057 CTTGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGGCGATCCCGGACAGCTCCCGCCCGT 5116 | || | |||||||| |||||||||| || |||||||| || ||| | ||||| | Sbjct 176583 CCTGATGAGCTTCGGCAAGCCGATCCTCGTGCTCGGCGATCCTGGCCAGTTGCCGCCGAT 176524 Query 5117 ---GGGCGGCACCCCCTTCTTCAAGAACAAGCCCGACATCCTGCTCACGGAGATTCACCG 5173 ||||| | ||||| | || |||| ||| | |||| || ||||| ||||| Sbjct 176523 CCGGGGCGAAGGCGCCTTCACCCGCGACGAGCCGGACGTGATGCTGACCGAGATCCACCG 176464 Query 5174 CCAGGCCCAGGACAACCCGATCATCTGGATGTCCAAGGAGGTCCGCGAGGGCCGCGTGCT 5233 ||||||| || | | | |||||| | | ||| || ||||||||||| | | Sbjct 176463 CCAGGCCGCCGAGAGCGCCATCATCCGCCTCGCCACCATGGCGCGCGAGGGCCGGTCGAT 176404 Query 5234 CCGCCCCGGCGACTACG 5250 | || ||||| ||||| Sbjct 176403 CGGCTTCGGCGTCTACG 176387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195194129435128