Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018283.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq15036 136 1e-27 >seq15036 Length=40235 Score = 136 bits (150), Expect = 1e-27 Identities = 305/458 (67%), Gaps = 30/458 (7%) Strand=Plus/Minus Query 18093 CGCCGCCCGTCGTCGAACCCGATGCACTACGTCATCGGCTTTGCCATCTTCTCGACGCGG 18152 ||||| || ||||| | |||| | | | |||| || ||||| |||||||| || Sbjct 39369 CGCCGGCCTACGTCGGCTCATATGCCCAAGCTGATCGCGTTCGCCATTTTCTCGACTCGA 39310 Query 18153 CGCATGGACGAGATCGCGCGCATCGCGTGGGACGACTACGACAAGGAAGGCAAGCGAGTC 18212 || ||| ||||| || ||||| ||||| |||| ||| | ||| | || || Sbjct 39309 CGGCAGGAAGAGATTGCCCGCATTCGTTGGGATGACTTGGACCGGCTCGGCCAACGGGTG 39250 Query 18213 TTGGTCCGCGATATGAAGAACCCCGGCGAGAAGGTCGGGAACGACGTGTGGTGCGATCTG 18272 |||| || || ||||||||||| || ||||| |||| ||||| ||||||||| ||||| Sbjct 39249 CTGGTGCGTGACATGAAGAACCCTGGGCAGAAGATCGGTAACGATGTGTGGTGCCATCTG 39190 Query 18273 GTGCCCGAGGCTATCGCGATCATCGAGGCCATGCCGC--GTGTCGCCGACCAAATCTTCC 18330 ||||||||| || ||||||||||| |||||||| || ||||| | || |||| Sbjct 39189 CCGCCCGAGGCGATGGCGATCATCGACAGCATGCCGCAGGTTGCGCCG--GAGATATTCC 39132 Query 18331 CCTACAGCCCCGACGCGATGGGCGCGGCCTTCACGCGGGCGTGCTACCTGCTCGGCATCA 18390 |||||| | | | || | || | | | |||||| |||| | | |||| |||| Sbjct 39131 CCTACAACGGCAAGTCGGTAGGTACATCATGGGCGCGGGTGTGCAAGTTTCTCGAAATCA 39072 Query 18391 ACACGGAAGAGATGCCGGAAGAAAAGCGCCTGCACTTCCACGATCTGCGCCATGACGGCG 18450 ||| |||||| || || || ||||| || || |||| Sbjct 39071 -----------ATG-------------ACCTGCATTTTCATGACCTGCGGCACGATGGCG 39036 Query 18451 TATCGCGTCTGTTCGAAATGGGTTGGAACATCCCGCACGTCGCGGCCGTGTCCGGGCACC 18510 || || ||||||| |||| |||| | ||||||| || || ||||| || || | Sbjct 39035 TAAGCCGGTTGTTCGAGATGGATTGGGATATCCCGCGGGTGGCCAGTGTGTCTGGCCATC 38976 Query 18511 GAAGCTGGAAAAGCCTTCA-GCGCTACACGCACCTACG 18547 | |||| || | || | |||||||||||| || || Sbjct 38975 GGGACTGG-AACTCTTTGAGGCGCTACACGCATCTGCG 38939 Score = 122 bits (134), Expect = 3e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 13773 GACCACGGCGTTCCTGCTAATGGCTCGTTACGAGGGCCAGCCGATCATTCCCGTCGATGT 13832 || |||||| ||| |||| ||||| | ||| | ||| | ||||||| ||| |||| Sbjct 38562 GAACACGGCATTCTTGCTCATGGCCCAGTACAACGGCATGGCGATCATCCCCATCGAGCG 38621 Query 13833 CGTTTGCCGGGACTTCTTCAGCCACTTGACCGTCGAGAAGTTCGTGCGGAAGGTCAGCGC 13892 ||| || |||| |||| ||| | ||| |||||| | |||| |||| | || | Sbjct 38622 CGTGTGTGCCGACTACTTCTCGCACCTTACCCCCGAGAAACTGCTGCGCAAGGCCGGCAC 38681 Query 13893 TGGCGAGATCGCGATCCCGCTCGTTCGCATGGAGAGCAGCCAGAAGGCCGCGAAGGGCGT 13952 || || |||| | ||| || ||||| ||| |||||||||| || ||||||||||| Sbjct 38682 CGGTGAAATCGACTTACCGATCACCCGCATCGAGGGCAGCCAGAAAGCGGCGAAGGGCGT 38741 Query 13953 GCACCTGATCGACCTGGCCGCCTATCTCGACG 13984 |||||| |||||||||| |||| ||||||| Sbjct 38742 GCACCTCTCCGACCTGGCCACCTACCTCGACG 38773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185288974933864