Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq10932 87.8 5e-13 >seq10932 Length=55943 Score = 87.8 bits (96), Expect = 5e-13 Identities = 149/214 (70%), Gaps = 14/214 (7%) Strand=Plus/Plus Query 17912 AAGGGCGGCTCGCTCTATGTTTCGACATCGTTTCGTGGCGGCACGCT---GCGCTATCTT 17968 || ||| ||||| | | || ||||| | |||||||||||||| |||| || Sbjct 29185 AACGGCAGCTCGATTCAGGTGTCGACCAGCTACCGTGGCGGCACGCTACAGCGC---CTG 29241 Query 17969 CATGTGTCCGAGTTCGGGAAGATCTGCGCAAAGTACCCGGACAAGGCGCGCGAAATTGTC 18028 ||||| || |||||||| ||||| ||| |||||||||||||| || || || || Sbjct 29242 CATGTCTCGGAGTTCGGCAAGATTTGCCGCAAGTACCCGGACAAAGCCAAGGAGATCGTG 29301 Query 18029 ACTGGTGCTTTTGAAGCTGT----TTCAACTGACTGTTTCACGACGATTGAAAGCACAGC 18084 ||||| || || || || || || | | ||| |||| | ||| ||||| Sbjct 29302 ACTGGCGCCTTCGAGGCGGTGGGGTTGGGCAATCAGTT----GACGCTGGAATCGACAGC 29357 Query 18085 AGAAGGCCGCGCGGGCTATTTCTTCGATTATTGC 18118 |||||| |||| |||||| |||||||| || ||| Sbjct 29358 AGAAGGGCGCGAGGGCTACTTCTTCGACTACTGC 29391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127521679613952