Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2234 159 3e-34 seq87354 140 3e-28 seq32926 98.7 8e-16 seq2937 84.2 2e-11 seq8853 82.4 6e-11 >seq2234 Length=154088 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | |||||| | ||| || |||||||||||||| || || ||||| | Sbjct 12104 CCTCCTCTGAGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGAC 12045 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||||||| ||||| || |||||||| ||||| || ||| Sbjct 12044 AGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGA 11985 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| || || |||||| ||| ||| |||| | || ||| | ||| ||| Sbjct 11984 ATTCCTTCTTTGTCCTGGATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACT 11925 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | || | ||||| || |||| ||| |||||||| || |||||| Sbjct 11924 TCTAATGTAATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCATG 11877 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | ||||||||| | |||||||||||||| || |||||||| | Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| ||||| |||||||| ||||| || | | ||||||||| || || Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||||||||| ||| || |||||| |||||| | || ||| Sbjct 11528 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTACT 11469 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| |||||||| |||| ||||| || || || |||||| Sbjct 11468 TCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCATG 11421 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | || | ||| | ||||| || ||||||||||| ||||||||||| | Sbjct 10966 TTCCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAATCTG 10907 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || | ||||| || ||||| |||| | ||| ||||| || | Sbjct 10906 AAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTG 10847 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || |||||||||||||| || || ||| |||| | |||||| | |||| Sbjct 10846 GGATACCCTCTTTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCTCCA 10787 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||||| ||||| || || | ||| || ||||| |||||||| Sbjct 10786 CTTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | || |||| ||| || ||||||||||| || || ||||| || | Sbjct 11420 CCTCCTCTAAGCCTCAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAT 11361 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||||||| ||||| |||||||||||||| || || ||| Sbjct 11360 AGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGA 11301 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||| |||||| || ||| |||||| ||||| | ||| | Sbjct 11300 ATACCTTCTTTATCTTGGATTTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTT 11241 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || || |||||||| |||||||| ||||| Sbjct 11240 TCTAAGGTTATGGTCTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | ||| || || || |||||||| || || ||||| ||||| | Sbjct 12872 CCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGAC 12813 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| |||| || | ||| ||||| ||||| || || | ||| ||||| || ||| Sbjct 12812 AAAGTTCTGCCATCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGA 12753 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||| || ||||| ||| ||| | || | || ||| | ||| ||| Sbjct 12752 ATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACT 12693 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| |||||||| || | ||||| ||||| || |||||| Sbjct 12692 TCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCATG 12645 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||||||||| | | ||||| ||| || ||||| |||||||| || |||||||| | Sbjct 12332 CCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCCGAC 12273 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | || ||||| ||||| |||| | || ||||| || ||| Sbjct 12272 AGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGA 12213 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||||||||||||| ||| ||| |||| | || || | ||| ||| Sbjct 12212 ATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTCTACT 12153 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || || || || | ||||| ||||| || |||||| Sbjct 12152 TCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCATG 12105 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | || | ||| || ||||| || |||||||| || ||||||||||| | Sbjct 11192 CCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAC 11133 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | || || || || || ||||| | ||| || || || || Sbjct 11132 AGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAGGG 11073 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||||||||| || |||||| ||| ||| |||||| ||||| | ||| ||| Sbjct 11072 ATGCCTTCTTTATCCTGGATTTTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTCAACT 11013 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || || || | ||| ||||| ||||| ||||| Sbjct 11012 TCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAATATTTGCAT 10966 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||||| | || || || |||||||| ||||| ||||| || ||||| || | Sbjct 11876 CCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAGTCCGAC 11817 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||||| || ||||| || || || |||||||| || || Sbjct 11816 AGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATCAGGAGGG 11757 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| |||||||||||||| ||| ||| |||| | || ||| | || ||| Sbjct 11756 ATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATTGTATCACTTGGCTCAACT 11697 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || || || | |||||| || || || ||||| Sbjct 11696 TCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 116 bits (128), Expect = 3e-21 Identities = 139/187 (74%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAG--TTCTGGCAT 101315 || |||| ||| || || |||||||| || || || || || |||||| ||| | ||| Sbjct 12629 AAGACTAGATGCAGAGTTGATTCTTTCTGAATGTTATAGTC--CGATAGGGTTCGGCCAT 12572 Query 101316 CGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTAT 101375 | || | ||| |||||||| || || || | ||| ||||| || ||||| |||||||||| Sbjct 12571 CTTCAAGTTGTTTACCTGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTAT 12512 Query 101376 CTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCG 101435 |||||||||| ||| ||| | || | || ||| | ||| ||||||||||| | | Sbjct 12511 CTTGAATTTTAGCTTTCACATTCTCAATGGTATCACTTGGTTCAACTTCAAGAGTAATGG 12452 Query 101436 TTTTGCC 101442 |||| || Sbjct 12451 TTTTACC 12445 >seq87354 Length=3251 Score = 140 bits (154), Expect = 3e-28 Identities = 272/402 (68%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 42722 CCAAGCACCTTTAAAGTCATAGCTCATTAAAAATATTTTATCCAAATAGTTTTGAGCATC 42781 ||| ||||| | |||||||||||||||| || || | ||||| ||| | |||||| | Sbjct 624 CCATGCACCATAGTAGTCATAGCTCATTAAGAAAATGTAATCCATATATTGTTGAGCTTG 683 Query 42782 GTTGTAATCGACAATAGCGATTTTGTCGTCTCCCGCACTAATTGCGCTAGTCAATTCGTA 42841 ||| |||||| | |||||||||| ||||||| ||| || || ||||| || Sbjct 684 TGAGTAGTCGACATCTTCAATTTTGTCGTAACCCGCACCAATCGCTGATGTTAATTCATA 743 Query 42842 TTTGCGATTAGTTTCGTTTTCTAGTTCGTCCAGCATGTCGCGCAATTCTCGTAACAAAAC 42901 | ||| || ||| ||| || | || ||||| | |||| ||| | | || | Sbjct 744 CTCACGACCTGTCTCGGCTTCAAGCTTATCAAGCATCGCTCGCAGCTCTTGCATTAACGC 803 Query 42902 TACATACGTAAGACCGTCATTTTGAGGATCTCCAATTGTCGGATTAGCTCCTTTACCACC 42961 || || | | | |||||| || || || | | |||||||| || | |||||| Sbjct 804 AACGTATGCAGGGCCGTCAGCAACTGGGTCGCCTAAATTTGGATTAGCACCCTGACCACC 863 Query 42962 GGGAAATTCCCAATCAATATCGACGCCGTCAAAAAATTTCCAAGTGAGCAAAAACTCACG 43021 || ||||||| |||||||| || ||||| | || ||||| || |||||||| Sbjct 864 AGGGTATTCCCAGTCAATATCTACACCGTCGTAGAACTTCCACGTTCTTAAAAACTCTTC 923 Query 43022 TACTGAATCCACAAATATTTTACGCTTGTTTGCATCGCTGAAAAAATAAAACGGGTCGGA 43081 | ||| ||||||| | | || || | |||| | ||| || ||| ||||| || Sbjct 924 CATTGATGCCACAAACGTGTCGCGATTTGCTTTATCGGTAAAATAAGCAAATGGGTCTGA 983 Query 43082 CAATGTCCATCCACCTATCGAAGGTAACACTTTAAGATGAGG 43123 || ||||| ||||| | ||| ||||| | ||| |||| ||| Sbjct 984 TAAAGTCCAACCACCCACCGATGGTAAAATTTTCAGATCAGG 1025 >seq32926 Length=14205 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/213 (70%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| || || | ||||| || || || ||||| || || | | ||||| |||| Sbjct 13909 AAAACCAAGTGTACAGTAGACTCCTTCTGAATATTATAGTCAGACAGGGTTCTTCCATCT 13968 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| || ||||| || | ||| |||||||| || || || ||||| || ||| Sbjct 13969 TCCAA-------CCAGCAAAAATGAGACGTTGTTGATCTGGTGGTATTCCTTCCTTGTCT 14021 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || ||| ||| || |||| | || ||| | || ||||| || || | ||| Sbjct 14022 TGGATCTTTGCTTTAACGTTTTCAATAGCATCACTGGGCTCGACTTCTAGTGTAATTGTT 14081 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| |||||| || |||||||||||| Sbjct 14082 TTTCCTGTTAGAGTTTTGACGAATATCTGCATG 14114 >seq2937 Length=135122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||||| |||||| ||||| ||||||||||| || || |||||||| | Sbjct 15054 CCACCTCTCAGACGTAGAACTAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAATCAGAC 14995 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | |||||| || ||||| || || || || || || || ||| Sbjct 14994 AACGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATTAATCGTTGCTGGTCAGGTGGA 14935 Query 101363 ATGCCT 101368 || ||| Sbjct 14934 ATACCT 14929 >seq8853 Length=67315 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/143 (73%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 13761 CATAACCGTTGGGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGA 13820 ||||||| || || || || ||||||| ||| ||||| || || ||||| || || | Sbjct 65845 CATAACCATTTGGGTCACGGCCATCCAGACTATATTTATCATTAAAATAAATTGCAA--A 65902 Query 13821 TTAAAGCCACTGT--AGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCT 13878 || || | | | ||| | | | ||||||||||||||| || |||||||| || | Sbjct 65903 TTCCAGGCCTTCTTCAGGGCTATTTGTCCATTCTAATATTTTCTTGGCCCAATACATGCG 65962 Query 13879 CATATATCCGTGCATTTTGCCTT 13901 || | ||||||||||||| |||| Sbjct 65963 CAGAAATCCGTGCATTTTTCCTT 65985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395407924464252