Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq5 100 3e-16 >seq5 Length=869209 Score = 100 bits (110), Expect = 3e-16 Identities = 253/381 (66%), Gaps = 9/381 (2%) Strand=Plus/Plus Query 132149 CATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCTCAA 132208 ||||| || ||| || || | || |||||||| || ||||||||| || || ||| Sbjct 710966 CATACTGGCTGTATCCCGTTTTATAAGCATTTCCAGACCGCAGTAAAAAGCTGCTCGCAA 711025 Query 132209 GGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTAGAG 132268 || ||| | ||||||||||| || || || || || ||||||| | ||||| || Sbjct 711026 GGCGGTGTGCGTGGTGGTGCCGCCACCCTGTTCTACCCCTTGTGGCATCTGGAAGTGGAA 711085 Query 132269 AACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATGGAC 132328 || | || |||||||||||| || || || || ||||| | | ||| ||||| Sbjct 711086 TCGCTGCTGGTACTGAAAAATAACCGCGGTGTAGAAGAGAACCGGGTAAGGCATCTGGAC 711145 Query 132329 TACGGAATTCAAATTAATGACCTTATGATGGAACGCCTTGGTAAAAATGATTATATTACT 132388 || || | || |||| ||| ||| | ||||| |||| |||| ||||| || Sbjct 711146 TATGGCGTGCAGTTTAACCGCCTGATGTATCAGCGCCTGATTAAAGATGACTATATCACC 711205 Query 132389 TTATTTAGCCCTCACGAAATGTCAGGCGAACTATACTACTCGTTCTTTGAAGATCAAGAT 132448 || || ||||| || || | || || || | | |||||||||||||| || Sbjct 711206 TTGTTCAGCCCCTCTGATGTGCCGGG---GCTGTATGATGCCTTCTTTGAAGATCAGGAA 711262 Query 132449 AAATTCCGTG-AGC--TTTATGAGAAAGCTGAAAAAGACCCGACAATCAGAAAGAAAAGA 132505 || || || ||| | |||| ||| |||| ||| | ||| | || || | Sbjct 711263 AAGTT---TGAAGCCTTATATGTGAAGTATGAAGCTGACAGCAAGATCCGTAAAAAGCGC 711319 Query 132506 ATTAAAGCACTAGAACTCTTT 132526 ||||| ||| | ||||||||| Sbjct 711320 ATTAAGGCAGTCGAACTCTTT 711340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539958353926080