Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq363 93.3 4e-14 seq1973 82.4 8e-11 >seq363 Length=289854 Score = 93.3 bits (102), Expect = 4e-14 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 6759 CCTGCCATGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGGGTA 6818 |||||| ||||| ||||||||||| | | |||| ||||||||||||||| ||| || | Sbjct 11010 CCTGCCC-GGAGGCGTGGCAGAGTGGTTGAATGCACCGGTCTTGAAAACCGGCGACGGGA 11068 Query 6819 AAACCTCCGTGAGTTCAAATCTCACACCCTCCTCCATT 6856 || | | ||||||||| |||||||| ||||| ||||| Sbjct 11069 AACCGTTCGTGAGTTCGAATCTCACCGCCTCCGCCATT 11106 >seq1973 Length=162522 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 6762 GCCAT-GGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGG--GTA 6818 ||||| ||| | |||||||| || ||| |||| ||||||||||||||| ||||| || Sbjct 4923 GCCATTGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTG 4864 Query 6819 AAACCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 | ||||||||||||| |||||||| | ||| ||| Sbjct 4863 AGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 4828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491440708576320