Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_018860.1 Length=156176 Score E Sequences producing significant alignments: (Bits) Value seq21230 93.3 4e-14 seq457 86.0 6e-12 >seq21230 Length=25512 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 17718 ACAAAGGAGATCGTACTGGAACAGGTACTCGATCATTATTCGGAGCACAAATGCGCTTTG 17777 |||| || || |||||||| ||||| || || ||| |||| || |||||||| |||| Sbjct 9159 ACAAGGGCGACCGTACTGGTACAGGAACACGTTCAGTATTTGGTCATCAAATGCGTTTTG 9100 Query 17778 ATTTATCTAAAGGGTTCCCGATGCTAACAACAAAGAAACTCCCGTTCCGAGTGATTGTGG 17837 |||||||||| || ||||| | || || ||||| ||| | | ||||| || || Sbjct 9099 ATTTATCTAACGGTTTCCCACTACTCACCACAAAAAAAGTACATTTCCGCTCAATCGTCA 9040 Query 17838 AAGAGCTATTATGGTTTATTAGTGGAAGTACGAACGTTAAAGATTTATTGGACAAGAATG 17897 || ||| | |||||| ||| || ||| || ||| || | ||| ||||| || | Sbjct 9039 TTGAACTACTTTGGTTTCTTAAAGGTGATACCAATGTTCAATACTTAAAAGACAATAAAG 8980 Query 17898 TTCATATTTGGGATGA 17913 | ||||||||||| Sbjct 8979 TGACGATTTGGGATGA 8964 >seq457 Length=273712 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 741 GTGGACGGAGTAGGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTCTACCAAC 800 |||| | ||| ||| |||||||| |||||| ||||||||||| ||| |||||||||||| Sbjct 147641 GTGGCCTGAGCAGGAATCGAACCAGCGACACAAGGATTTTCAGTCCTTTGCTCTACCAAC 147700 Query 801 TGAGCTATCCGTCCA 815 ||||||||| | ||| Sbjct 147701 TGAGCTATCAGGCCA 147715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498509546876160