Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq17584 194 4e-44 seq23 167 5e-36 seq80752 145 2e-29 seq21230 107 4e-18 seq11470 104 5e-17 seq5 104 5e-17 seq80802 96.9 8e-15 seq31597 91.5 3e-13 seq17291 89.7 1e-12 seq100 87.8 4e-12 seq29819 86.0 1e-11 >seq17584 Length=33200 Score = 194 bits (214), Expect = 4e-44 Identities = 377/553 (68%), Gaps = 8/553 (1%) Strand=Plus/Minus Query 150277 ATATACAACTAACCTAACTGATCTTGCAGCAGAAGGTAAACTTGATCCACTAATTGGTCG 150336 |||||| | | | |||| || | |||| | ||| ||||| || ||| | |||||||| Sbjct 9978 ATATACGATTGATTTAACCGAACGTGCACTTGCAGGGAAACTCGACCCAGTGATTGGTCG 9919 Query 150337 CGAAACTGAACTTGATGATCTAATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGC 150396 || |||| || | |||||| || | |||||| |||||||| || || Sbjct 9918 TGATGATGAAATTCGTCGCACGATTCAGGTTTTATCTCGTCGCACCAAAAATAACCCTGT 9859 Query 150397 GTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCAT 150456 ||| |||||||||| ||||| |||||||| |||||||| || ||||||||||| || Sbjct 9858 CTTAATTGGTGAACCTGGTGTGGGTAAAACTGCGATCGTTGAAGGTTTAGCACAACGTAT 9799 Query 150457 CGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGG 150516 | ||||||||| || || || | |||| || | ||||||||| || |||| Sbjct 9798 CATTAATGGTGAAGTCCCTGAAAGTTTGAAGAATAAGCGTGTGCTTTCTTTGGATTTGGG 9739 Query 150517 TGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCT 150576 | |||| ||| ||| | || ||||||||||| || || || || || | | | || Sbjct 9738 TTCATTACTTGCAGGTGCAAAATATCGTGGTGAGTTTGAGGAGCGCCTAAAGGCTGTTCT 9679 Query 150577 ACAAGAACT---AAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTAT 150633 |||| || |||| | | || | ||||||||||||||||| | ||||| | Sbjct 9678 CAAAGATCTTGCAAAACATGAAGGGGAAATCATTCTGTTCATCGATGAGTTACATACACT 9619 Query 150634 TATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGC 150693 | ||||| || || || | ||| | |||| | |||||||| ||||| || Sbjct 9618 CGTTGGTGCAGG---GAAAGGTGATGGTGCGATGGACGCAGGTAATATGTTGAAACCAGC 9562 Query 150694 TCTATCTCGCGGTGAAATTCG-TGTCATCGGTGCAACAACCTACGATGAATATCGTAAAC 150752 | | || |||||| | || ||| | || ||||| |||| |||||||| ||| || Sbjct 9561 CTTGGCGCGTGGTGAATTACGCTGT-GTTGGCGCAACGACCTTAGATGAATACCGTCAAT 9503 Query 150753 ACATTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACCGA 150812 | ||||| |||||||| ||||| | ||||||||| || ||| ||| ||| |||| Sbjct 9502 ATATTGAGAAAGATGCTGCACTTGAACGTCGTTTCCAAAAAGTTTTGGTTGATGAGCCGA 9443 Query 150813 CACTTGAAGAAAC 150825 ||||||| || Sbjct 9442 GTGTTGAAGATAC 9430 >seq23 Length=559261 Score = 167 bits (184), Expect = 5e-36 Identities = 329/478 (69%), Gaps = 14/478 (3%) Strand=Plus/Plus Query 150380 ACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGAC 150439 ||||| || || || |||| ||||||| || ||||| |||||||| ||| || || Sbjct 125234 ACCAAGAATAACCCTGTGTTAATTGGTGAGCCTGGTGTGGGTAAAACCGCAATTGTAGAG 125293 Query 150440 GGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATT 150499 || || |||||||| ||| |||||||| || || || |||| || | Sbjct 125294 GGGTTGGCACAACGAATCATCAATGGTGAAGTACCTGAAAGCTTGAAGAATAAGCGTGTA 125353 Query 150500 CTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAA 150559 || |||||| || |||| |||| ||| ||| | || ||||| ||||| || || || Sbjct 125354 CTCTCTTTGGATTTGGGCTCATTACTTGCGGGTGCAAAATATCGAGGTGAGTTTGAGGAG 125413 Query 150560 CGTGTAGACAATTTGCTACAAGAACTAA--AAGAACGCGA-TGATGTTATTCTGTTCATC 150616 || || | | ||| |||| || ||| ||| | ||| | ||||| |||||| Sbjct 125414 CGCTTAAAAGCCGTTCTAAAAGACCTTGCGAAGCACGAGGGTGAAATCATTCTCTTCATC 125473 Query 150617 GATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGC 150676 ||||| | ||||| || | ||||| ||| | |||| ||| | ||||| | Sbjct 125474 GATGAGTTGCATACACTTGTTGGTGCAGGTAAG---GGCGATGGTGCGATGGATGCAGGT 125530 Query 150677 AATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTAC 150736 |||||||||||||||||| | |||| ||||| | ||| | |||||||| || | Sbjct 125531 AATATGTTAAAACCTGCTTTGGCTCGTGGTGAGTTGCGTTGTGTTGGTGCAACGACTTTA 125590 Query 150737 GATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGCGTCG-TTTCATGAAG-G 150794 |||||||||||| || |||||||||||||||| ||||| |||| || || || ||| Sbjct 125591 GATGAATATCGTCAATACATTGAAAAAGATGCTGCACTTGAGCGCCGCTTCCAAAAAGTC 125650 Query 150795 TTGATATTGTTGAACCGACACTTGAAGAAAC--TCGCCAGATTGTACTTGGTGTTAAA 150850 ||| || | |||||||| | ||||| || | || ||| ||| |||| ||||| Sbjct 125651 TTGGTA--GATGAACCGAGTGTGGAAGATACGATTGC--AATTTTACGTGGTCTTAAA 125704 >seq80752 Length=4292 Score = 145 bits (160), Expect = 2e-29 Identities = 382/572 (67%), Gaps = 21/572 (4%) Strand=Plus/Plus Query 150291 TAACTGATCTTGCAGCAGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTTG 150350 ||||||| | |||| ||||||| ||||||||| | ||||| || || ||| || Sbjct 3103 TAACTGAGCGAGCAGAGCAAGGTAAGCTTGATCCAGTCATTGGCCGTGATGACGAAATTC 3162 Query 150351 ATGATCTAATTCAGATTCTTTCT-CGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAA 150409 | | || || | | || | || || ||||| ||| | |||| ||||||| Sbjct 3163 GTCGTACTATCCA-AGTATTACAACGCCGTACTAAAAATAATCCGGTGTTAATTGGTGAG 3221 Query 150410 CCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGAT 150469 || || || |||||||| ||| | || || | || ||||| || ||||| || Sbjct 3222 CCGGGGGTAGGTAAAACGGCAATTGCCGAAGGCCTTGCGCAACGAATTATCAATGGAGAA 3281 Query 150470 GTTCCAGATTC--TATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTG 150527 || || || || ||| | | ||| | ||| || | ||||| || || Sbjct 3282 GTACCTGAAGGCTTAAAAAACAAGCGAGTATTATCGCTTG--ATTTAGGTGCTTTGGTTG 3339 Query 150528 CTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGA--CAATTTGCTACAAGAACT 150585 | ||| |||| || ||||||||||| ||||| ||| || | || | | | | ||||| Sbjct 3340 CGGGTGCTAAATACCGTGGTGAATTTGAAGAGCGTTTAAAATCAGTAT--TGAATGAACT 3397 Query 150586 A---AAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGC 150642 |||||| | | || || || || || |||||||| |||||||| | || || Sbjct 3398 TGCCAAAGAAGAAGGCCAAGTCATCCTCTTTATTGATGAAATTCATACTATGGTAGGCGC 3457 Query 150643 TGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCG 150702 ||| || | ||| | | ||||| | | ||||||||||| ||||| || | || Sbjct 3458 AGGTAAAACAGACGGAG---CAATGGATGCGGGTAATATGTTAAAGCCTGCACTTGCCCG 3514 Query 150703 CGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAA 150762 ||||| | | | | | ||||| |||||| ||||| |||||| || |||||||||| Sbjct 3515 TGGTGAGTTACATTGCGTGGGTGCCACAACCCTTGATGAGTATCGTCAATACATTGAAAA 3574 Query 150763 AGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACCGACACTTGAAGA 150822 |||||| ||||| ||||||||||| ||||| | ||| |||||| | ||||||| Sbjct 3575 AGATGCGGCACTTGAGCGTCGTTTCCAAAAGGTATTTGTTGATGAACCATCGGTTGAAGA 3634 Query 150823 AAC--TCGCCAGATTGTACTTGGTGTTAAAAG 150852 || | || |||| ||| |||| ||||||| Sbjct 3635 CACCATTGC--GATTTTACGTGGT-TTAAAAG 3663 >seq21230 Length=25512 Score = 107 bits (118), Expect = 4e-18 Identities = 196/286 (69%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 133892 CTTATTGATGGATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAAT 133951 ||||| ||| | | || | ||||| |||| || |||| || | ||| ||||| Sbjct 8818 CTTATCAATGAAATCAAGACCAATCCCAATTCACGTCGTCTAATCGTTTCTGGTTGGAAC 8759 Query 133952 GTTGGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTA 134011 | |||| || |||| || | || || || || ||| || |||||||||||| Sbjct 8758 CCTAATGAAGCAGGTAAAGTGGCATTACCGCCTTGCCATACGTTGTTCCAATTCTTCGTA 8699 Query 134012 AATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTA 134071 | ||| ||| | ||||| || |||||||| || |||| ||||| |||| || Sbjct 8698 CAAGACAATAAACTCTCATGCCAACTGTATCAACGCAGTGCTGATGTATTCCTAGGTGTT 8639 Query 134072 CCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTA 134131 ||||| || ||||| ||| | |||| || |||||| | || ||||| ||||| || Sbjct 8638 CCATTTAATATTGCGAGTTATGCCCTACTTACGCATATGATTGCGCAAGTATGTGGTTTG 8579 Query 134132 GAAGTTGGTGAGTTTGTATGGATGGGTGGAGATGTTCACATTTATA 134177 | |||||||| ||||| |||| || || || | |||||||||| Sbjct 8578 GGTGTTGGTGACTTTGTCTGGACAGGCGGCGA--TACACATTTATA 8535 >seq11470 Length=53368 Score = 104 bits (114), Expect = 5e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134036 CTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAACATTGCTTCATATTCA 134095 || ||||||||||| ||| |||| ||||| || ||||| || |||||| ||| | Sbjct 34406 CTTTATCAACGTAGTGCAGATGTATTTTTAGGTGTGCCATTTAATATTGCTAGCTATGCC 34347 Query 134096 TTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAGTTGGTGAGTTTGTATGGATG 134155 |||| || |||||| | |||||||| ||||| ||||| ||||| || ||||| |||| Sbjct 34346 CTACTCACCCATATGATTGCACAAGTCTGTGGTTTAGATGTTGGGGACTTTGTTTGGACT 34287 Query 134156 GGTGGAGATGTTCACATTTATAAAAATCACGTAGAAGCAGTTCAGGAACAACTTTCACGT 134215 ||||| ||| ||| | ||| ||| ||| | || || | ||||||| | ||| Sbjct 34286 GGTGGTGATACACACTTATATGCAAACCACTTTGAGCAAGCCAAATTACAACTTACTCGT 34227 Query 134216 GAACC 134220 ||||| Sbjct 34226 GAACC 34222 >seq5 Length=869209 Score = 104 bits (114), Expect = 5e-17 Identities = 275/414 (66%), Gaps = 12/414 (3%) Strand=Plus/Plus Query 150380 ACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTG 150437 |||||||| || ||| | || ||||||| || ||||| ||||||||| || || | Sbjct 16660 ACCAAAAATAACCCGGTAC--TAATTGGTGAGCCTGGTGTGGGTAAAACAGCGATTGTCG 16717 Query 150438 ACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAA 150497 | ||| | || || ||||| | ||| || || || || | ||||| Sbjct 16718 AAGGACTGGCGCAGCGCATTGTGAATAAAGAAGTCCCGGAAGGGTTAAAAGACAAGCGGG 16777 Query 150498 TTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAG 150557 | || || || ||||||| || | ||||| |||| ||||| |||||||| |||| Sbjct 16778 TACTCTCACTGGATATGGGCGCGCTGCTGGCTGGCGCTAAATATCGCGGTGAATTTGAAG 16837 Query 150558 AACGTGTAGACAATTTGCTACAAGAACTA---AAAGAACGCGATGATGTTATTCTGTTCA 150614 |||| || | | || | ||| || |||||| | | | |||||||| | Sbjct 16838 AACGCCTAAAAGCGGTACTGAATGAAGTAGCCAAAGAAGAAGGCCAGATCATTCTGTTTA 16897 Query 150615 TCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGA 150674 | |||||||| ||||| || | ||||| || | | || ||| | |||| Sbjct 16898 TTGATGAAATTCATACCATGGTCGGTGCCGGCAAGGC---CGATGGTGCCATGGACGCTG 16954 Query 150675 GCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCG-TGTCATCGGTGCAACAACC 150733 | ||||||||||| || || ||| | ||||||||| | | ||| | || || || || Sbjct 16955 GTAATATGTTAAAGCCGGCACTAGCGCGCGGTGAACTGCACTGTT-TGGGCGCCACTACG 17013 Query 150734 TACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGCGTCGTTTC 150787 ||||||||||| ||| | ||||| |||||||| || || ||||||||||| Sbjct 17014 CTGGATGAATATCGCAAATATATTGAGAAAGATGCGGCGCTGGAGCGTCGTTTC 17067 >seq80802 Length=4284 Score = 96.9 bits (106), Expect = 8e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 324511 ATATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTC 324570 || |||||||||||||||| |||||||||| |||||||||||| || |||||| | |||| Sbjct 1889 ATGTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCAGTTC 1948 Query 324571 GAACCCGTTTAGCTCCAC 324588 || || | |||||||||| Sbjct 1949 GATCCTGCTTAGCTCCAC 1966 >seq31597 Length=15385 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 301099 ATGGCGAAATTGGTAGCACGCAGGAGACTCAAAATCTCCCGCCAGAGATGGCGTGTCGGT 301158 |||||||||| ||||| |||||||||||| |||||||| |||||| |||||||| |||| Sbjct 15 ATGGCGAAATCGGTAG-ACGCAGGAGACTTAAAATCTCTCGCCAGTAATGGCGTGCCGGT 73 Query 301159 TCGAGTCCGACT 301170 ||||||||| || Sbjct 74 TCGAGTCCGGCT 85 >seq17291 Length=33881 Score = 89.7 bits (98), Expect = 1e-12 Identities = 255/385 (66%), Gaps = 8/385 (2%) Strand=Plus/Minus Query 150270 TTGAAGCATATACAACTAACCTAACTGATCTTGCAGCAGAAGG-TAAACTTGATCCACTA 150328 ||||| ||||||| ||| ||| | ||| ||| |||| |||| ||||| || Sbjct 27334 TTGAACAATATACACTGAACTTAAAT-ATCGAAGCGCAAAAGGGTAAAACAGATCCTTTA 27276 Query 150329 ATTGGTCGCGAAACTGAACTTGAT-GATCTAATTCAGATTCTTTCTCGTAAAACCAAAAA 150387 |||||||| |||| ||| | || || | | ||||| || | |||| ||||| Sbjct 27275 ATTGGTCGTGAAAAAGAAATCGAGCGAGC-AGCACAGATCCTATGTCGTCGGCGTAAAAA 27217 Query 150388 GAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGC 150447 || | ||||||| || || ||||| ||||||||| || | ||| |||||||| Sbjct 27216 TAACCCATTGCTAGTTGGCGATCCCGGTGTAGGTAAAACATCTATTGCTGAAGGATTAGC 27157 Query 150448 ACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTTCTTT 150507 || | ||||||| | | ||| | || | | ||| |||| | | ||| Sbjct 27156 TTGGTTAATTGTTAATGGTAAAGCACCAAAACCTCTAGCAAATGCTGAAGTATATAGTTT 27097 Query 150508 GAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGA 150567 | |||| ||||| || ||||| || || ||||||||||| || || | ||| || | Sbjct 27096 GGATATCGGTGCGTTAGTCGCTGGAACAAAATATCGTGGTGACTTTGAGAAGCGTTTAAA 27037 Query 150568 CAATTTGCTACAAGAACT--AAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATC 150625 | || || | | | ||||||| ||| ||| |||| | || || |||||||| Sbjct 27036 ACAGTTATTAAATGCTTTGAAAAAGAATCCGA--ATGCTATTTTATTTATAGATGAAATT 26979 Query 150626 CATACTATTATGGGTGCTGGTGCGA 150650 |||| ||||| ||||||||| ||| Sbjct 26978 CATATGATTATCGGTGCTGGTTCGA 26954 >seq100 Length=411593 Score = 87.8 bits (96), Expect = 4e-12 Identities = 185/273 (68%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 111566 GATGAATATGCACTTGCACGTATTGAACGTAAAACTGGTACTGGATACGATGGTTTTTCT 111625 || |||||||| || || |||| |||||||| |||| ||||| |||| ||| Sbjct 279690 GAAGAATATGCTCTCGCGCGTACAGAACGTAAGTCTGGCGTGGGATATCATGGATTTCAA 279631 Query 111626 GTTGAAACCCAGGGT---GTAACTTTGGAACAAGATTTATTCCGTCGAGATTTAACTATC 111682 || | ||| | || | || ||| |||||||| | ||||| ||| | || ||| Sbjct 279630 TTTCATACCGATAAAACAGTCAAATTAGAAGAAGATTTAATACGTCGTGATCTCACCATC 279571 Query 111683 AATGCTATTGCTTGGGACCCAATTACTAAAACCCATATCGACCCATATAAAGGCAAAGAA 111742 ||||| || || ||| || | |||| ||| || || ||| || |||| Sbjct 279570 AATGCAATGGCAATGGATGAAAATGG--AAACATTTAT-GATCCCTATGGTGGTCAAGAT 279514 Query 111743 GATCTAAAAAATAAAGTACTGAAACATGTATCAGATGCATTCAAAGAAGATCCACTTCGT 111802 ||||| || | ||| | || ||||| |||||||| || | ||||||||||||||| Sbjct 279513 GATCTTAACCAAAAAATTCTTCGTCATGTCTCAGATGCTTTTATTGAAGATCCACTTCGT 279454 Query 111803 GTTCTGCGTCTTGCACGTTTCGCTGCTCGTTAT 111835 ||| | || ||||| | || ||||| |||||| Sbjct 279453 GTTTTACGCGTTGCAAGATTTGCTGCACGTTAT 279421 >seq29819 Length=16985 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 284188 GGATGTGGTGAAATTGGCAGACACGCCAGATTTAGGTTCTGGTTCTTC--GGAGTGCGAG 284245 ||| ||||||||||||| |||||| ||||||||||||||||| | | || ||| ||| Sbjct 14315 GGACGTGGTGAAATTGGTAGACACACCAGATTTAGGTTCTGGCGCCGCAAGGTGTGAGAG 14374 Query 284246 TTCGAGTCTCGCCATCCCCACCAT 284269 |||||||||| || ||| |||||| Sbjct 14375 TTCGAGTCTCTCCGTCCGCACCAT 14398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1144940299613528