Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq12585 361 1e-94 seq1 140 6e-28 seq52710 134 2e-26 seq1110 104 4e-17 seq15784 98.7 2e-15 seq8290 98.7 2e-15 seq7 86.0 1e-11 >seq12585 Length=48618 Score = 361 bits (400), Expect = 1e-94 Identities = 772/1142 (68%), Gaps = 46/1142 (4%) Strand=Plus/Plus Query 168268 CCTAACCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCT 168327 |||| || || ||||| | |||||| ||||| | | ||||||| || || Sbjct 43192 CCTATCCTTTCACGCATACCACCTGTCGCAGGGTATGCATCACTTCCACCAGCTCGCGCT 43251 Query 168328 GGGCCGCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTT 168387 |||| |||| || | ||||| |||||| ||| |||| | |||||||||||| | Sbjct 43252 GGGCGTCCATTACCTGGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGTCGG 43311 Query 168388 CGTCCTTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCT 168447 ||||||| ||||| |||||| |||||| | || || ||||||| || | |||| Sbjct 43312 CGTCCTTTCGGCATTCGACGTGGGCCGTGGCCTTGATCTGGTCGTCCACGGTAAACAGCT 43371 Query 168448 TCTTCGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGT 168507 |||||||| | ||| |||| |||||||||||||||||||| |||||||| || | Sbjct 43372 TCTTCGCCTTGGTACGGCTCATGGTTCGGCCGGCGCCGTGGCTGCAGGAGCAGAACGCTT 43431 Query 168508 CAGCGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGATGC 168567 | ||| ||| |||||| |||||||| |||||| ||||| || || || ||||| | Sbjct 43432 CCTCGTTCCCCAGGCCGCGTACGATGAAGCTCTTGGCCCCCATGGAGCCGGGGATGATCC 43491 Query 168568 CGAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGA 168627 | || || |||||| |||||||||||| || || || || || | | || || |||| Sbjct 43492 CCAGCTCACCCTTCTTCGCCGACACCGCACCTTTTCGCGTTACCAGCACCTCTTCACCGA 43551 Query 168628 AGTGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGA 168687 ||||||| ||||| | ||||||||||||||||||||||| |||||| | | || Sbjct 43552 AGTGGCGCTCCTTCTGCACGTAGTTGTGGTGACAGTTCACTGCTTCCAGCGCCACGTCGA 43611 Query 168688 ACGCCGGCACGA--ACTCC-CGGATCGCCTTGAGCACGCGGACCATCATCATGTCGCGGT 168744 ||| | || || || || |||| || ||| | |||||||| |||||| Sbjct 43612 ACGGCTTGCTGATCACGCCTCGTGCCGCCGCGATCACTGCGTGCATCATCAGTGCGCGGT 43671 Query 168745 TCAGGCGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGTCGTCGAAATCCTGCT 168804 || | |||||||| |||||||||||||||||||| | |||||||| ||| | ||| Sbjct 43672 TCTGCTTGGCGAAGTCCTGCGCCCAGCCCACGGCTTCCACGTAGTCGTTGAAGTGCTGGC 43731 Query 168805 CGCCCACTTCGAGCCACGCGAGGTTCTCGTCCTGCGGGCGCACATGGCGCTTTG-----C 168859 ||| |||||| | || ||| ||| ||||| | ||||| | || Sbjct 43732 TGCCTTCTTCGAAGTAGGCCAGG---TCGCGGTGCGGCAG--GTTGGCGATGTGTTGGTG 43786 Query 168860 CAGGGCGTTCTTCGCCTTCTCGATGAAGTAGTTGCCGATCACGTTGCCGACGCCGCGCGA 168919 || || || ||| |||||||| ||| ||||| |||| || |||||||| || Sbjct 43787 CATATCGGCCTGGGCCAGTTCGATGAACAGGTTACCGATGGCGTTACCTACGCCGCGTGA 43846 Query 168920 TCCCGAGTGCAGCATCACCCACACGTTCGGGTCCGTCGTCCCCTGATCGGTCTGGATGCA 168979 ||| ||||||||| | ||||||| ||| | | | || ||| | ||| Sbjct 43847 TCCGCTGTGCAGCATGAACCACACG--CGGTT--GGCTTC-----ATC------CAGGCA 43891 Query 168980 GATTTCGATGAAGTGGTTGCCGCCACCCAGCGACCCGAGTTGGGTCACGTTGTTCGACGT 169039 || |||||||||||||| ||| ||||| | || || || | |||||| | | | Sbjct 43892 GACCTCGATGAAGTGGTTACCGGTTCCCAGGGTTCCCAGGTGTTTGCGGTTGTTGGTCTT 43951 Query 169040 CTCCAAGATCGGATGCTTTTCGCACAGCTTCTTGAACCGCGCCTCCAGCCCAGAATCGAT 169099 ||||| |||| ||||| ||| | | |||||| ||| | |||| | || Sbjct 43952 CTCCAGCTTCGGGTGCTTGTCGGTGATCAGCTTGAAGCGCTCGCTCAGCGCCGA------ 44005 Query 169100 CCAGGCACGCATGATAGAGTTCGGGATGCCATG-ACGACCCGGTTCCTGCCACGAACCCT 169158 |||||| | | | || || || || | | || || ||| || | Sbjct 44006 CCAGGCGTGGTCGGT-CAGCTCCGG----CACGTTCTCCCAGGCACCTTTATCGCGGGCG 44060 Query 169159 TCGCGCCCGG----CCCGCCGTGCGGAACCGCACGTTCGATCGCCGAACGCATCGCCGCC 169214 ||||||||| | ||||||||| || || ||||| || | |||| | ||| Sbjct 44061 CCGCGCCCGGAAGTACGGCCGTGCGGCACGGCCTTCTCGATGGCGGCGCGCAGGCCGGCC 44120 Query 169215 AAGTTGTCCGGCAGTTGCGAAGCAGTCAGCGTGGTGCGCACAGCCATCATGCCGCAGCCG 169274 | ||| |||||||| | || |||||||||||||| | || ||||||||||| ||| Sbjct 44121 AGGTTATCCGGCAGGTCGTGGGCCATCAGCGTGGTGCGCGCGGCGATCATGCCGCAACCG 44180 Query 169275 ATGTCGACGCCGACCGCGTACGGGATCACCGCATCCTTGGTCGGGATCACCGAACCAACG 169334 || || || || || || |||||| | ||| | || |||||||| || | | Sbjct 44181 ATATCCACACCAACGGCCGCCGGGATAATCGCGCCGACCGTGGGGATCACGCTGCCGATG 44240 Query 169335 GCTGCG-CCGTACCCGGCGTGGACGTCGGGCATCACCGCGACGTGCTTGAACACGAACGG 169393 | | | || ||||| | ||| ||||| ||||||||||| | ||||||||| | |||||| Sbjct 44241 GTCGAGCCCTTACCCAG-GTGCACGTCCGGCATCACCGCCAGGTGCTTGAAGATGAACGG 44299 Query 169394 CA 169395 || Sbjct 44300 CA 44301 >seq1 Length=1655743 Score = 140 bits (154), Expect = 6e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 120315 CCCTGACGCGCCAGCGTAGCGAGGCGGATGATCGGGTTGTCGGCGGCTTGGCGGTGGATT 120374 |||| ||||||| || |||||||||||||| | | | |||||||| ||||||||||| Sbjct 176413 CCCTCGCGCGCCATGGTGGCGAGGCGGATGATGGCGCTCTCGGCGGCCTGGCGGTGGATC 176472 Query 120375 TCGGTCAGGAAGAAGTCGGGATCGCCGGCCGTCAGCCCCGGCTTGTCGCCG-ACCGGCGG 120433 |||||||| | | ||| || ||| || || | | | ||| | ||| | |||||| Sbjct 176473 TCGGTCAGCATCACGTCCGGCTCGTCGCGGGTGAAGGC-GCCTTCGCCCCGGATCGGCGG 176531 Query 120434 AAGCTGACCGGGATCGCCCATCGCCAGGATCGGCACGCCGAACGACATCAGGTCTTTCGC 120493 | ||| || |||||||| | | | ||||||||| |||||| ||||||||| ||| Sbjct 176532 CAACTGGCCAGGATCGCCGAGCACGAGGATCGGCTTGCCGAAGCTCATCAGGTCGCGCGC 176591 Query 120494 CATGTCGAAGCCGACCATCGACGCCTCGTCGACGACGAT 120532 ||| || ||||||||||||| ||||||||| ||||| Sbjct 176592 CATCTCCTCGCCGACCATCGACACCTCGTCGAGCACGAT 176630 >seq52710 Length=7253 Score = 134 bits (148), Expect = 2e-26 Identities = 207/290 (71%), Gaps = 4/290 (1%) Strand=Plus/Plus Query 168555 CCCGGAATGATGCCGAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAG 168614 || ||||||||||| |||||| ||| |||| ||||||||||||||||||||| | Sbjct 24 CCGGGAATGATGCCAAGTTCGCCCTCGCGCGCACTCACCGCGCCCTTGCGGGTCACCAGC 83 Query 168615 ATGTCCTCGCCGAAGTGGCGT-TCCTTGTTGACGTAGTTGTGGTGACAGTTCACCG-CTT 168672 | |||| |||| || |||| ||||| | |||||||||||||| |||||||||| | | Sbjct 84 AGTTCCTGGCCGTGGT-GCGTCTCCTTCTGTACGTAGTTGTGGTGGCAGTTCACCGCCAT 142 Query 168673 CCTTGTCGGTCTTGAACGCCGGCACGAACTCCCGGATCGCCTTGAGCACGCGGACCATCA 168732 | | | | || |||| ||||| | || ||| | ||||| || ||||| Sbjct 143 CGCCGCCAG-CTGGAACTTCGGCAACCGGTGGCGCATCTCGGCCAGCACCCGCGACATCA 201 Query 168733 TCATGTCGCGGTTCAGGCGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGTCGT 168792 || ||||||||| | || ||| |||| || ||||| ||| ||||||| |||||| | Sbjct 202 TCGCCTCGCGGTTCTGCCGGGCGTAGTCCTGTGCCCACGACACCGCTTCGACGTAGTCAT 261 Query 168793 CGAAATCCTGCTCGCCCACTTCGAGCCACGCGAGGTTCTCGTCCTGCGGG 168842 |||| | ||||||| | || |||| |||| || |||| || || Sbjct 262 CGAACAGCGGCTCGCCTTCCATGAAGAACGCCAGGTCCTTGTCCGGCAGG 311 Score = 89.7 bits (98), Expect = 9e-13 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332 ||||| ||||||| ||| ||| || ||| || | || |||| || ||| || Sbjct 7013 CCCTTCACGCACAGCACTTGCCGCAGCGTGTGCACCACGTCGACCAGATCGAGCTGTGCG 7072 Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392 ||||| || ||||||| |||||| ||| ||||| |||||| | ||| || |||| Sbjct 7073 GCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGACTCGTCCAGCACACCGCTGTCC 7132 Query 168393 TTGCGGCACTCGACGCCCTTCGTGGCTTCGACG-TGCTCGTCCAGGGAGACGAGCTTCTT 168451 |||||||| || ||| | || ||||| ||| |||| | |||| | || ||| Sbjct 7133 TTGCGGCATTCCACGTGCGCGGTCGCTTC-ACGATGCTGGGCCAGCGTGATCTGCTGGCG 7191 Query 168452 CGC--CGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCA 168493 ||| ||||| || ||| || |||||||||||||||||||| Sbjct 7192 CGCAGCGCCG--CGGCTCATCACCCGGCCGGCGCCGTGGCTGCA 7233 >seq1110 Length=205023 Score = 104 bits (114), Expect = 4e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||| Sbjct 47768 TGATGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTC 47827 Query 133019 AAATCCCTCCCCCGCATCCA 133038 |||||| |||||||||||| Sbjct 47828 AAATCCAACCCCCGCATCCA 47847 Score = 100 bits (110), Expect = 5e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 || ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||| Sbjct 29881 TGGTGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTC 29822 Query 133019 AAATCCCTCCCCCGCATCCA 133038 |||||| |||||||||||| Sbjct 29821 AAATCCAACCCCCGCATCCA 29802 >seq15784 Length=38140 Score = 98.7 bits (108), Expect = 2e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 132962 TGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAA 133021 |||||| |||||||||| ||||||||||| ||||||||||| |||||||| |||||||| Sbjct 36323 TGCGGGATGGAGCAGTCTGGTAGCTCGTTAGGCTCATAACCTAAAGGTCGTTGGTTCAAA 36264 Query 133022 TCCCTCCCCCGCATCCA 133038 ||| | |||||||||| Sbjct 36263 TCCAGCTCCCGCATCCA 36247 >seq8290 Length=70922 Score = 98.7 bits (108), Expect = 2e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||| Sbjct 40060 TGATGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTC 40001 Query 133019 AAATCCCTCCCCCGCATCCACA 133040 |||||| ||||||| ||||| Sbjct 40000 AAATCCAGCCCCCGCTACCACA 39979 >seq7 Length=747525 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 61659 TCAGTGTGTGGCGCAGTTTGGTAGCGCGCTTGCTCGGGATGCAAGAGGTCGCAGGTTCAA 61718 || ||| |||||||| |||||||||| |||| | || | |||| |||||||||||||| Sbjct 440107 TCGGTGATTGGCGCAGCTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAA 440048 Query 61719 ATCCTGCTACACTGACCAGTTTAAG 61743 ||||||| ||| ||||| |||||| Sbjct 440047 ATCCTGCATCACCGACCATTTTAAG 440023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893748283089120