Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq12585 358 9e-94 seq52710 141 1e-28 seq1 96.9 5e-15 seq89615 89.7 7e-13 seq144939 87.8 3e-12 seq103 87.8 3e-12 >seq12585 Length=48618 Score = 358 bits (396), Expect = 9e-94 Identities = 646/935 (69%), Gaps = 21/935 (2%) Strand=Plus/Plus Query 137303 ATTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGG 137362 ||||||||||||||| |||||||||| ||||| || ||| | ||||||||||||||| Sbjct 43293 ATTTCGTCGATCACGTCGGCGTCCTTTCGGCATTCGACGTGGGCCGTGGCCTTGATCTGG 43352 Query 137363 TCCTCCAGAGTGAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGC 137422 || |||| || || | ||| |||| ||| || ||| || ||||| |||||||| Sbjct 43353 TCGTCCACGGTAAACAGCTTCTTCGCCTTGGTACGGCTCATGGTTCGGCCGGCGCCGTGG 43412 Query 137423 GAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCC 137482 ||| |||||||||| ||| | || ||| |||||| |||||| || |||||||||| Sbjct 43413 CTGCAGGAGCAGAACGCTTCCTCGTTCCCCAGGCCGCGTACGATGAAGCTCTTGGCCCCC 43472 Query 137483 ATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTC 137542 || ||||||||||||||||| | || |||||| |||||||||||| || || || || Sbjct 43473 ATGGAGCCGGGGATGATCCCCAGCTCACCCTTCTTCGCCGACACCGCACCTTTTCGCGTT 43532 Query 137543 ACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACC 137602 || | ||| || |||||||| |||||||| |||||||||||||| |||||||| Sbjct 43533 ACCAGCACCTCTTCACCGAAGTGGCGCTCCTTCTGCACGTAGTTGTGGTGACAGTTCACT 43592 Query 137603 GCTTCCTTGTCCGTCTTGAACGGC-GGCAGGCCCGACGCC-CGCATGGCCTCCAGGACCC 137660 |||||| || | ||||||| || | | ||||| || ||| | | || Sbjct 43593 GCTTCCAGCGCCACGTCGAACGGCTTGCTGATC--ACGCCTCGTGCCGCCGCGATCACTG 43650 Query 137661 GGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCA 137720 | |||||||| ||||||| | ||||||||||| ||||| | |||||||||| Sbjct 43651 CGTGCATCATCAGTGCGCGGTTCTGCTTGGCGAAGTCCTGCGCCCAGCCCACGGCTTCCA 43710 Query 137721 CGTAGTCGTGGAACT-CCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGC 137779 ||||||||| ||| | | |||| |||||| || | || ||||| || | || | Sbjct 43711 CGTAGTCGTTGAAGTGCTGGCT-GCCTTCTTCGAAGTAGGCCAGGTCGCGGTGCGGCAGG 43769 Query 137780 TTGCGCCCGTCACGGCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATG 137839 ||| || || ||| ||| ||| |||| |||||||| | | |||||| Sbjct 43770 TTGGCGATGTGTTGGTGCA-TATC--GGCCTGGGCCAGTTCGATGAACAGGTTACCGATG 43826 Query 137840 GTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGATCCTCGTCG 137899 | ||| || |||||||| || || ||| ||||| | ||| ||||| | | || || Sbjct 43827 GCGTTACCTACGCCGCGTGATCCGCTGTGCAGCATGAACCACACGCGGTTGGCTTCATCC 43886 Query 137900 AGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTG 137959 ||||||||||||||||||||||| ||| |||||||| ||||| || | ||||| Sbjct 43887 AGGCAGACCTCGATGAAGTGGTTACCGGTTCCCAGGGTTCCCAGGTGTTTGCGGTTGTTG 43946 Query 137960 GCGTTCTTCAGCGCCGGGTACTTCTCGCAGAGCTTGTCGAACCGCGCCTCCAGGCCCGAA 138019 | |||| |||| ||||| ||| ||| || | | ||| ||| | ||| |||| Sbjct 43947 GTCTTCTCCAGCTTCGGGTGCTTGTCGGTGATCAGCTTGAAGCGCTCGCTCAGCGCCGA- 44005 Query 138020 TCGACCCACTTGCGCAGGATCGAGTTGGGGA--TGCCGCTGCGCCCGTTCCAGCCGCCCG 138077 ||| | | | || | || | | | | || | || || || Sbjct 44006 -----CCAGGCGTGGTCGGTCAGCTCCGGCACGTTCTCCCAGGCACCTTTATCGCGGGCG 44060 Query 138078 ACGGACCCGG----CCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGAC 138133 || ||||| | ||||||||| ||||| | |||||| | ||| || || | Sbjct 44061 CCGCGCCCGGAAGTACGGCCGTGCGGCACGGCCTTCTCGATGGCGGCGCGCAGGCCGGCC 44120 Query 138134 AGGCTGTCGGGGAGGTCCGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCG 138193 ||| | || || ||||| || |||| ||||||| | || ||||||||||| ||| Sbjct 44121 AGGTTATCCGGCAGGTCGTGGGCCATCAGCGTGGTGCGCGCGGCGATCATGCCGCAACCG 44180 Query 138194 ATGTCGACGCCGACGGCGGCCGGGATGATCGCGCC 138228 || || || || ||||| |||||||| |||||||| Sbjct 44181 ATATCCACACCAACGGCCGCCGGGATAATCGCGCC 44215 >seq52710 Length=7253 Score = 141 bits (156), Expect = 1e-28 Identities = 211/297 (71%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 137480 CCCATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGG 137539 ||||| |||||| ||||| || | | | ||| |||| |||||||||||||||| Sbjct 15 CCCATGCTGCCGGGAATGATGCCAAGTTCGCCCTCGCGCGCACTCACCGCGCCCTTGCGG 74 Query 137540 GTCACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTC 137599 ||||| | | || | || ||| |||||||| ||||||||||||||||||||| Sbjct 75 GTCACCAGCAGTTCCTGGCCGTGGTGCGTCTCCTTCTGTACGTAGTTGTGGTGGCAGTTC 134 Query 137600 ACCGCTTCCTTGTCCGTCTTGAACGGCGGCAGGCCCGACGCCCGCATGGCCTCCAGGACC 137659 ||||| | || || |||| ||||| ||| | | |||| | |||| ||| Sbjct 135 ACCGCCATCGCCGCCAGCTGGAACTTCGGCAA--CCGGTGGC-GCATCTCGGCCAGCACC 191 Query 137660 CGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCC 137719 || ||||||| ||||||||| ||| ||| ||||||| |||| | || ||||| Sbjct 192 CGCGACATCATCGCCTCGCGGTTCTGCCGGGCGTAGTCCTGTGCCCACGACACCGCTTCG 251 Query 137720 ACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGC 137776 |||||||| | |||| |||||||||||| || | || |||||||||||| || Sbjct 252 ACGTAGTCATCGAACAGCGGCTCGCCTTCCATGAAGAACGCCAGGTCCTTGTCCGGC 308 >seq1 Length=1655743 Score = 96.9 bits (106), Expect = 5e-15 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 90175 GCCTTCGCGCGCCAGGGTCGACAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTGGAT 90234 ||| |||||||||| ||| | ||| ||||||| | | || |||||| |||||||| Sbjct 176412 GCCCTCGCGCGCCATGGTGGCGAGGCGGATGATGGCGCTCTCGGCGGCCTGGCGGTGGAT 176471 Query 90235 TTCCGACAGGAAGAAGTCCGGATCATTG-GCCAGCAGGCCCGCGTCGTCCTCGACCGGGG 90293 || | ||| | | |||||| || | | | | |||| | | ||| || || ||| | Sbjct 176472 CTCGGTCAGCATCACGTCCGGCTCGTCGCGGGTGAAGGCGC-CTTCGCCCCGGATCGGCG 176530 Query 90294 GAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATCAGGTCGTCGG 90353 | | ||| ||||||||||| | ||| ||||||| ||| | |||||||||| | Sbjct 176531 GCAACTGGCCAGGATCGCCGAGCACGAGGATCGGCTTGCCGAAGCTCATCAGGTCGCGCG 176590 Query 90354 TCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAG 90396 |||| | || |||||||| ||| ||||||||| |||||||| Sbjct 176591 CCATCTCCTCG-CCGACCATCGACACCTCGTCGAGCACGATCAG 176633 >seq89615 Length=3101 Score = 89.7 bits (98), Expect = 7e-13 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 129125 CTTGCCCGGATCGGTGATCGGGTCCTTGTAGATTTCGACCCACTCGCCGTTGATCTCCTG 129184 |||||| | |||||||||||||||||||||| |||| ||||||||||| | | | || Sbjct 190 CTTGCCGGCGTCGGTGATCGGGTCCTTGTAGACATCGATCCACTCGCCGTCCACC-CGTG 132 Query 129185 -GGCCGAGGACTTCATCGCCCACTTGTTGGTGTCGCGGTCCAG 129226 |||||| |||||| ||| |||| | ||| ||||||||||| Sbjct 131 CGGCCGAACACTTCAGCGCGAACTTCTGGGTATCGCGGTCCAG 89 >seq144939 Length=1205 Score = 87.8 bits (96), Expect = 3e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 49315 ATCGGGGTGTAGCTCAGTC-GGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCG 49373 |||||||| |||||||||| ||||||||||| ||||||||| ||||| ||| |||||| Sbjct 15 ATCGGGGTATAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGTAGGTTCG 74 Query 49374 AGTCCCGCCACCCAGACCAA 49393 | ||| || |||| |||||| Sbjct 75 AATCCTGCTACCCCGACCAA 94 >seq103 Length=407632 Score = 87.8 bits (96), Expect = 3e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 49315 ATCGGGGTGTAGCTCAGTC-GGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCG 49373 |||||||| |||||||||| ||||||||||| ||||||||| ||||| ||| |||||| Sbjct 40753 ATCGGGGTATAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGTAGGTTCG 40812 Query 49374 AGTCCCGCCACCCAGACCAA 49393 | ||| || |||| |||||| Sbjct 40813 AATCCTGCTACCCCGACCAA 40832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708122632721280