Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq12585 349 5e-91 seq52710 141 1e-28 seq1 96.9 5e-15 seq89615 89.7 7e-13 seq144939 87.8 3e-12 seq103 87.8 3e-12 >seq12585 Length=48618 Score = 349 bits (386), Expect = 5e-91 Identities = 646/932 (69%), Gaps = 37/932 (4%) Strand=Plus/Plus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGT 136137 |||| |||||||||| ||||| || ||| | ||||||||||||||||| |||| ||| Sbjct 43304 CACGTCGGCGTCCTTTCGGCATTCGACGTGGGCCGTGGCCTTGATCTGGTCGTCCACGGT 43363 Query 136138 GAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA 136197 || | ||| |||| ||| || ||| || ||||| |||||||| ||| ||||| Sbjct 43364 AAACAGCTTCTTCGCCTTGGTACGGCTCATGGTTCGGCCGGCGCCGTGGCTGCAGGAGCA 43423 Query 136198 GAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGG 136257 ||||| ||| |||| ||| |||||| |||||| || |||||||||||| |||||||| Sbjct 43424 GAACGCTTCCTCGTTCCCCAGGCCGCGTACGATGAAGCTCTTGGCCCCCATGGAGCCGGG 43483 Query 136258 GATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCA 136317 ||||||||| | || |||||| |||||||||||| || || || || || | ||| Sbjct 43484 GATGATCCCCAGCTCACCCTTCTTCGCCGACACCGCACCTTTTCGCGTTACCAGCACCTC 43543 Query 136318 CTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTC 136377 || |||||||| |||||||| |||||||||||||| |||||||| |||||| | Sbjct 43544 TTCACCGAAGTGGCGCTCCTTCTGCACGTAGTTGTGGTGACAGTTCACTGCTTCCAGCGC 43603 Query 136378 CGTCTTGAACGGC-GGCAGGCCCGACG-CTCGCATGGCCTCCAGGACCCGGACCATCATC 136435 | | ||||||| || | | ||| |||| ||| | | || | ||||||| Sbjct 43604 CACGTCGAACGGCTTGCTGATC--ACGCCTCGTGCCGCCGCGATCACTGCGTGCATCATC 43661 Query 136436 ATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGG 136495 | ||||||| | ||||||||||| ||||| | ||||||||||||||||||| | Sbjct 43662 AGTGCGCGGTTCTGCTTGGCGAAGTCCTGCGCCCAGCCCACGGCTTCCACGTAGTCGTTG 43721 Query 136496 AACT-CCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCGTC 136554 || | | |||| |||||| || | || ||||| || | || | || || Sbjct 43722 AAGTGCTGGCT-GCCTTCTTCGAAGTAGGCCAGGTCGCGGTGCGGCAGGTTGGCGATGTG 43780 Query 136555 ACGGCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGAC 136614 || ||| ||| ||| |||| |||||||| | | ||||||| ||| || || Sbjct 43781 TTGGTGCA-TATC--GGCCTGGGCCAGTTCGATGAACAGGTTACCGATGGCGTTACCTAC 43837 Query 136615 GCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTC 136674 |||||| || || ||| ||||| | ||| ||||| | | | || || ||||||||||| Sbjct 43838 GCCGCGTGATCCGCTGTGCAGCATGAACCACACGCGGTTGGCTTCATCCAGGCAGACCTC 43897 Query 136675 GATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAG 136734 |||||||||||| ||| |||||||| ||||| || | |||||| |||| ||| Sbjct 43898 GATGAAGTGGTTACCGGTTCCCAGGGTTCCCAGGTGTTTGCGGTTGTTGGTCTTCTCCAG 43957 Query 136735 CGCCGGGTACTTCTCGCAG---AGCTTG------TCGAACCGCGCC-TCCAGGCCCGAGT 136784 | ||||| ||| ||| | |||||| ||| | ||||| |||||| | || Sbjct 43958 CTTCGGGTGCTTGTCGGTGATCAGCTTGAAGCGCTCGCTCAGCGCCGACCAGGCGTG-GT 44016 Query 136785 CGACCCACTTGCGCAGGATCGAGTTGGGGATGCCGCTGCGCCCGT-TC-CAGCCGCC-CG 136841 || | || ||| | || || || || | || | | |||| || Sbjct 44017 CGGTCAGCTCCGGCACGTTC-----------TCCCAGGCACCTTTATCGCGGGCGCCGCG 44065 Query 136842 -ACGGACCCGGCCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGCGAGG 136900 |||| | | ||||||||| ||||| | |||||| | ||| || ||| ||| Sbjct 44066 CCCGGA--AGTACGGCCGTGCGGCACGGCCTTCTCGATGGCGGCGCGCAGGCCGGCCAGG 44123 Query 136901 CTGTCGGGAAGGTCCGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATG 136960 | || || ||||| || |||| ||||||| | || ||||||||||| ||||| Sbjct 44124 TTATCCGGCAGGTCGTGGGCCATCAGCGTGGTGCGCGCGGCGATCATGCCGCAACCGATA 44183 Query 136961 TCGACGCCGACGGCGGCCGGGATGATCGCGCC 136992 || || || ||||| |||||||| |||||||| Sbjct 44184 TCCACACCAACGGCCGCCGGGATAATCGCGCC 44215 >seq52710 Length=7253 Score = 141 bits (156), Expect = 1e-28 Identities = 211/297 (71%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 136244 CCCATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGG 136303 ||||| |||||| ||||| || | | | ||| |||| |||||||||||||||| Sbjct 15 CCCATGCTGCCGGGAATGATGCCAAGTTCGCCCTCGCGCGCACTCACCGCGCCCTTGCGG 74 Query 136304 GTCACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTC 136363 ||||| | | || | || ||| |||||||| ||||||||||||||||||||| Sbjct 75 GTCACCAGCAGTTCCTGGCCGTGGTGCGTCTCCTTCTGTACGTAGTTGTGGTGGCAGTTC 134 Query 136364 ACCGCTTCCTTGTCCGTCTTGAACGGCGGCAGGCCCGACGCTCGCATGGCCTCCAGGACC 136423 ||||| | || || |||| ||||| ||| | ||||| | |||| ||| Sbjct 135 ACCGCCATCGCCGCCAGCTGGAACTTCGGCAA--CCGGTGG-CGCATCTCGGCCAGCACC 191 Query 136424 CGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCC 136483 || ||||||| ||||||||| ||| ||| ||||||| |||| | || ||||| Sbjct 192 CGCGACATCATCGCCTCGCGGTTCTGCCGGGCGTAGTCCTGTGCCCACGACACCGCTTCG 251 Query 136484 ACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGC 136540 |||||||| | |||| |||||||||||| || | || |||||||||||| || Sbjct 252 ACGTAGTCATCGAACAGCGGCTCGCCTTCCATGAAGAACGCCAGGTCCTTGTCCGGC 308 >seq1 Length=1655743 Score = 96.9 bits (106), Expect = 5e-15 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 89332 GCCTTCGCGCGCCAGGGTCGATAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTGGAT 89391 ||| |||||||||| ||| | ||| ||||||| | | || |||||| |||||||| Sbjct 176412 GCCCTCGCGCGCCATGGTGGCGAGGCGGATGATGGCGCTCTCGGCGGCCTGGCGGTGGAT 176471 Query 89392 TTCCGACAGGAAGAAGTCCGGATCATTG-GCCAGCAGGCCCGCGTCGTCCTCGACCGGGG 89450 || | ||| | | |||||| || | | | | |||| | | ||| || || ||| | Sbjct 176472 CTCGGTCAGCATCACGTCCGGCTCGTCGCGGGTGAAGGCGC-CTTCGCCCCGGATCGGCG 176530 Query 89451 GAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATCAGGTCGTCGG 89510 | | ||| ||||||||||| | ||| ||||||| ||| | |||||||||| | Sbjct 176531 GCAACTGGCCAGGATCGCCGAGCACGAGGATCGGCTTGCCGAAGCTCATCAGGTCGCGCG 176590 Query 89511 TCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAG 89553 |||| | || |||||||| ||| ||||||||| |||||||| Sbjct 176591 CCATCTCCTCG-CCGACCATCGACACCTCGTCGAGCACGATCAG 176633 >seq89615 Length=3101 Score = 89.7 bits (98), Expect = 7e-13 Identities = 83/103 (81%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 127889 CTTGCCCGGATCGGTGATCGGGTCCTTGTAGATTTCGACCCACTCGCCGTTGATCTCCTG 127948 |||||| | |||||||||||||||||||||| |||| ||||||||||| | | | || Sbjct 190 CTTGCCGGCGTCGGTGATCGGGTCCTTGTAGACATCGATCCACTCGCCGTCCACC-CGTG 132 Query 127949 -GGCCGAGGACTTCATCGCCCACTTGTTGGTGTCGCGGTCCAG 127990 |||||| |||||| ||| |||| | ||| ||||||||||| Sbjct 131 CGGCCGAACACTTCAGCGCGAACTTCTGGGTATCGCGGTCCAG 89 >seq144939 Length=1205 Score = 87.8 bits (96), Expect = 3e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 48465 ATCGGGGTGTAGCTCAGTC-GGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCG 48523 |||||||| |||||||||| ||||||||||| ||||||||| ||||| ||| |||||| Sbjct 15 ATCGGGGTATAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGTAGGTTCG 74 Query 48524 AGTCCCGCCACCCAGACCAA 48543 | ||| || |||| |||||| Sbjct 75 AATCCTGCTACCCCGACCAA 94 >seq103 Length=407632 Score = 87.8 bits (96), Expect = 3e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 48465 ATCGGGGTGTAGCTCAGTC-GGTAGAGCGCTCGGTTCGGGACCGAGAGGCCGTGGGTTCG 48523 |||||||| |||||||||| ||||||||||| ||||||||| ||||| ||| |||||| Sbjct 40753 ATCGGGGTATAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGTAGGTTCG 40812 Query 48524 AGTCCCGCCACCCAGACCAA 48543 | ||| || |||| |||||| Sbjct 40813 AATCCTGCTACCCCGACCAA 40832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699783063778560