Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019416.1 Length=38513 Score E Sequences producing significant alignments: (Bits) Value seq34826 113 1e-20 >seq34826 Length=13225 Score = 113 bits (124), Expect = 1e-20 Identities = 320/491 (65%), Gaps = 3/491 (1%) Strand=Plus/Minus Query 31211 ACGCTATGGACAAGGCTTACGGTATCTCTCACTCCGACCAGTTCTCCAACAGCTCTGTCA 31270 |||| | |||||||| || || ||| |||||||||| ||| | ||| | Sbjct 5910 ACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCTGACTCGCTGG 5851 Query 31271 TTGACGAGAACATCGAGGGTCTGGTAGGTATCGAGAACAACTCCTTCTTGGAGGCCCGTA 31330 | || ||| || | ||| || ||| | ||||||||| || | | || || |||| Sbjct 5850 TAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTACCTCGAAGCTCGTA 5791 Query 31331 ACCTCTTTGACTCTGACCTTCCGGTGACTCTGCCGGACGGCCAACAGTTCTCCGTGAATG 31390 ||||||| ||||| || | || | || ||| |||||||| | |||| | ||||||| Sbjct 5790 ACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCGTTCGCTGTGAATG 5731 Query 31391 ACCTGCGTGACTTCGATATGTTCCGCATCATGCCAGCGTATGACCGCCGTATCAACGGTG 31450 |||| || |||||| | || | || | | || ||| |||||| | ||||||||| Sbjct 5730 ACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGGGTCAACGGTG 5671 Query 31451 ACATTGCCATCATGGGCTCGACAGGGAAGAACACTAAGGAACTCAAGGACTCCATTATGG 31510 |||| ||| ||||||| || |||||| |||| | || ||| || | | | Sbjct 5670 ACATCGCCCTCATGGGTGGCACCGGGAAGGACACCCGGACCCTGAAGAACATGGTCAACG 5611 Query 31511 AGCTGAGCAAGAAGGCCGAGAACAACGGTCAGCTCAAGGGCGAAGTGGAAGCTCTCAAGG 31570 || || | | | ||| | |||| || | | || | ||| |||| || Sbjct 5610 GAATGCGCCAAAGGTCCG---CCCACGGCGAGGACGCTCGGGAGGCTGAATACCTCATGG 5554 Query 31571 ATACCGTCAAGATTCTCACTGGGCGAGCCCGTAGGAATCAAGACACTGCCTTCGAGACTG 31630 | || | ||||| ||||| || || || || | ||| ||| ||| | ||| | Sbjct 5553 ACGCCCTGAAGATGCTCACCGGACGCGCTCGGCGCGATCCTGACGGCACCTGGGCGACCG 5494 Query 31631 CACTACGTTCCATCAATGACCTTGGCTTCTTCGCAAAGAACGCCTACATGGGCGCTCAGA 31690 | || ||| | || ||| | || || | | ||||||||||||||||||| |||| Sbjct 5493 TAGCGCGATCCTTGAACGACATCGGGTTTGCCACGAAGAACGCCTACATGGGCGTACAGA 5434 Query 31691 ACATCACCGAG 31701 ||||||||||| Sbjct 5433 ACATCACCGAG 5423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122856485956200