Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019487.1 Length=143986 Score E Sequences producing significant alignments: (Bits) Value seq1499 107 2e-18 >seq1499 Length=182485 Score = 107 bits (118), Expect = 2e-18 Identities = 405/630 (64%), Gaps = 19/630 (3%) Strand=Plus/Minus Query 103432 GTATGACAAAGAG-TTCCGTTTCCCATCTTTTATGAGTGCGTTTAAGTTCTACAACGACT 103490 ||||| |||||| |||||||||| |||||||||| || || ||||| | | | | Sbjct 108197 GTATG-CAAAGAAATTCCGTTTCCAATCTTTTATGGCGGCCTTCAAGTTTTTCCAAAGTT 108139 Query 103491 ATGCGCTTA------AAACGAACGACAAAAAACGTATCTTAGAACGGTACGAAGACCGTG 103544 |||||||| | || || ||| || |||| || ||||||||||||| Sbjct 108138 ATGCGCTTCGCGATGATTCGGGGGAGAAAT------TCCTAGAGCGTTACGAAGACCGTG 108085 Query 103545 TTGTAATTGTAGCGCTTTTCTTTG---GAGATGGAGATGTTGAAAAGGCGTTAGCCTTTG 103601 | || || | | ||||| | |||| | || ||| |||| || | | | || Sbjct 108084 TGGTGGCGGTTTCTTTGTTCTTAGCAAGAGAAGAAGGCGTTCAAAAAGCTATCGAGTATG 108025 Query 103602 TAGACACTATGATGAATCAAGAGTTTCAACCTGCTACCCCTACGTTTTTAAACGCGGGAC 103661 ||| | ||||| |||||||| | |||||| |||||||| ||||| || ||||| ||| Sbjct 108024 CAGAGATCATGATCAATCAAGAATATCAACCCGCTACCCCGACGTTCTTGAACGCTGGAA 107965 Query 103662 GTAAACGTAGAGGAGAGCTTGTAAGCTGTTTCTTACTAGAGGTGGGGGACTCTCTGAACG 103721 |||||| || || | || ||||||||| ||| | || || ||||||| Sbjct 107964 AGAAACGTTCCGGCGAATTGGTTTCCTGTTTCTTGGATGAGATCGGCGATAACCTGAACG 107905 Query 103722 ACATTGCGATGGCGGTCGAGACTGCTATGCAACTGTCAAAAGTAGGCGGAGGCGTATCAT 103781 |||| ||||| || | || ||| || | ||| | || || || || || | Sbjct 107904 GTATTGGTTACGCGGTGGATTCGGCCATGAAATTATCATCTATTGGTGGTGGAGTGTCTT 107845 Query 103782 TAAACCTTTCGAAAATCCGTTCTCAAGGAGAAGCCATCAAAGAGATCAAGGGAGCTGCTA 103841 | || ||||||| ||||| | | || ||||| ||||||| | | | || || Sbjct 107844 TCAATATTTCGAAGATCCGCGCACGCGGTGAAGCGATCAAAGGGGTTGATGGCCGCGCAG 107785 Query 103842 AAGGCGTTGTAGGGGTTATGAAACTTCTTGATAACGCCTTCCGTTATGCAGACCAGATGG 103901 || ||| | | | ||||| | | || | ||||| ||||| | || ||| Sbjct 107784 GTGGTGTTCTTCCGATCATGAAGATCATGGAAGATACCTTCTCGTATGCCAATCAATTGG 107725 Query 103902 GACAACGACAAGGCTCTGGTAGC-GCGTATTTAAATATTTTTCACGCCGATATTAATGAG 103960 ||||||| | || | || ||| | ||||| ||||| || ||| | || ||| | || Sbjct 107724 GACAACGTCCTGGTGCAGG-AGCTGTCTATTTGAATATCTTCCACTCGGACATTGAAGAA 107666 Query 103961 TTCCTCGATACAAAGAAAATATCTGCTGACGAGGACGTGCGCGCTAAAACTTTGTCTATT 104020 ||| | ||| |||||||| || || ||| | || || || | || ||||| Sbjct 107665 TTCTTGGATTGTAAGAAAATCAATGTGGATGAGAAAGTACGTATCAAGTCCTTATCTATC 107606 Query 104021 GGTGTTGTAATTCCGGACAAGTTTATTGAA 104050 ||| | | ||||||| || || || ||| Sbjct 107605 GGTATCATCGTTCCGGATAAATTCATGGAA 107576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 459589429949760