Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5663 87.8 3e-12 >seq5663 Length=92856 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||| | || |||| || | ||||||||| | || ||||||||||||||||| Sbjct 79429 ACCAGGCATCAAACCTCTCTTCTTCAACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAA 79370 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 || || || ||||| || || || | | ||| || || ||||| || |||| Sbjct 79369 TATTCCTTCAACTGCAGCAAATGCAACTACTCGCTCACCAAAGGAAGCACTC---GCTGA 79313 Query 48310 ---GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGA 48344 ||||||| ||| ||||| || ||||||||||||| Sbjct 79312 GCTGATCCAGTTAAGAGCCCAATCAGCCTTCTTCTTGA 79275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929434103178240