Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq5 132 5e-26 seq100896 82.4 8e-11 >seq5 Length=869209 Score = 132 bits (146), Expect = 5e-26 Identities = 271/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 138501 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 138560 || |||||||| |||| ||| | | ||||| ||||||||||| ||||||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 138561 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138620 || || || ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 138621 CGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138680 || | || || || || || ||| || || ||||| ||||| || |||| || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 138681 ACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTCGGCACGAATCATACCA 138740 ||||||||| |||| || ||| || |||| || ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 138741 ACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCCTTA 138800 ||||||||||||| || ||||| | || | |||| ||||| | | || | | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 138801 TTGATAGACTTTAATGAATCACCTGCTTCAATAACAACGCATGAACTAAACTGCCGAGTT 138860 ||||| || | | ||||| ||||| | ||||| || || ||||| || ||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 138861 GGAGTACGGCAACCAGCCATAATAGGAGTTGGCAGTGAAATCT 138903 || ||||| || | ||||||||| || ||||||||||||| Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq100896 Length=2131 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 137553 GGCACGACTTGATTAAATGAACCTTCTTTAGATTCTTTAACACTTACTGGACCGCGTGGT 137612 ||||| ||||| || || ||| |||||| | |||||||||| | |||| |||||| Sbjct 140 GGCACTACTTGCTTTAAGATACCATCTTTACTTGCTTTAACACTGATATGACCACGTGGT 81 Query 137613 GGCTCGATGCCGTTGGTAGAGTTAGATACCTGACTTGACGATTCACAAGGCATAAGGGCC 137672 |||||||| || || || | |||||| | || ||| | || ||||||||||||| Sbjct 80 GGCTCGATACCATTTGTCGCGTTAGAGATTTGCGATGATGTCTCTGAAGGCATAAGGGCA 21 Query 137673 GAGAGTGTACTGTTACGGAT 137692 || || || |||||| || Sbjct 20 GATAGCGTTGAGTTACGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531468723827040