Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019505.1 Length=166452 Score E Sequences producing significant alignments: (Bits) Value seq5 132 5e-26 seq5373 91.5 2e-13 seq100896 86.0 7e-12 >seq5 Length=869209 Score = 132 bits (146), Expect = 5e-26 Identities = 271/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 138634 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138693 || || ||||| |||| ||| | | ||||| |||||||| || ||||||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 138694 ACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138753 || || || ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 138754 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138813 || | || || || ||||| ||| || || ||||| ||||| || |||| || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 138814 ACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAATCATACCA 138873 |||||||| |||| || | | || |||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 138874 ACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTA 138933 ||||||||||||| || ||||| | || | |||| ||||| | | ||| | | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 138934 TTGATAGACTTTAATGAATCACCTGCCTCAATAACAACGCATGAACTAAACTGCCGGGTT 138993 ||||| || | | ||||| |||||| | ||||| || || ||||| |||||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 138994 GGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAATCT 139036 || ||||| || | ||||||||| || |||| |||||||| Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq5373 Length=95907 Score = 91.5 bits (100), Expect = 2e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Plus Query 69192 AATTGGTCGAGGCAGTAGGGATCGAACCTACGACCTA--GGACTTAGA--AGGTCCTTGC 69247 || |||||| |||||||| |||||||||||||| || | | | |||| || Sbjct 61884 AAATGGTCGGAGCAGTAGGATTCGAACCTACGACCCCCTGGTCCCAAACCAGGT----GC 61939 Query 69248 TCTTCCTT-CTGAGCTATGCCCCGTAATTGGGGTGACCGATGGGAGTCGAACCCATGACT 69306 || || ||| ||||||| ||| ||||||||||| || |||| |||||||| ||| Sbjct 61940 ACTACCAGGCTGTGCTATGCTCCGAAATTGGGGTGAATGACGGGATTCGAACCCGCGACA 61999 Query 69307 ACGAGAATCACAATCTCGAGTTCTACCAACTGAACTAC 69344 || ||||||||||| | | |||||||||||| |||| Sbjct 62000 ACTGGAATCACAATCCAGGGCTCTACCAACTGAGCTAC 62037 >seq100896 Length=2131 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 137673 ATGTTCAATATTGGGCACGACTTGATTAAAGGAACCCTCTTTTGATTCTTTAACAGAGAC 137732 || |||| || ||||| ||||| || ||| ||| ||||| | |||||||| || Sbjct 153 ATTTTCATAATCAGGCACTACTTGCTTTAAGATACCATCTTTACTTGCTTTAACACTGAT 94 Query 137733 TGGTCCACGTGGAGGCTCGATACCGTTTGTACTGTTAGAAACTTGGGAAGATGACTCACA 137792 | |||||||| ||||||||||| ||||| |||||| | ||| || |||| ||| | Sbjct 93 ATGACCACGTGGTGGCTCGATACCATTTGTCGCGTTAGAGATTTGCGATGATGTCTCTGA 34 Query 137793 TGGCATAAGTGCTGATA 137809 |||||||| || |||| Sbjct 33 AGGCATAAGGGCAGATA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531318662670720