Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq16123 102 4e-17 seq3662 102 4e-17 >seq16123 Length=37093 Score = 102 bits (112), Expect = 4e-17 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 17072 CTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTG 17131 ||||| ||| ||||| ||||||||| |||||| ||||| || || ||||||| ||| Sbjct 14960 CTGCCGCGCTCGGGCCTGGGGCATAAACATGGCATCGTACTGGGCAATTTGGTGGGGCTG 14901 Query 17132 ATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGCAGC-GCTGAACC 17190 |||||||||||||||||||| ||| ||| || ||||||||||| || || | | Sbjct 14900 ATTGATTCGGACTATCAGGGGCCCTTGATGGTGTCGATGTGGAACCGCGGCAGCGACAGC 14841 Query 17191 ATACACTGTCAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGTGCAGGC 17250 | | | | || || || || | ||||| |||| | |||| || || ||||| Sbjct 14840 TTTAGCATTGA-ACCGGGCGACCGCATCGCCCAGCTGGTATTTATGCCGGTGGTACAGGC 14782 Query 17251 ACAGTTTGAGCTGGTTGA-TGAATTCACTGCTTCAGAACGTGGAGACGGCGGATTTGGCC 17309 | ||| | ||||| || | || || || ||||| ||||| || || || ||||| | Sbjct 14781 CGAATTTAATCTGGTCGAGGGCTTTGACAGC-TCAGAGCGTGGTGAAGGTGGCTTTGGTC 14723 Query 17310 AC 17311 || Sbjct 14722 AC 14721 >seq3662 Length=120183 Score = 102 bits (112), Expect = 4e-17 Identities = 167/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 17084 GGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTGATTGATTCGGAC 17143 || |||||||||||| ||| |||||| | || || | || ||| |||||||||| ||| Sbjct 7316 GGTCTTGGGCATAAACATGGTATTGTATTGGGTAATTTAGTCGGTTTGATTGATTCAGAC 7257 Query 17144 TATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGCAGCGCTGAACCATACA--CTGTC- 17200 || || || || |||| |||||| | |||||||| | ||| ||||| | | | Sbjct 7256 TACCAAGGCGAACTGATGGTTTCAGTTTGGAACCGTGG----GAAAAATACATTCCGCCT 7201 Query 17201 AG-CCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGTGCAGGCACAGTTTGA 17259 || || || |||||| | || ||| || |||| || || || || ||| |||| || Sbjct 7200 AGAGCCAGGCGAGCGTTTGGCGCAATATGTACTCGTTCCGGTCGTTCAAGCAGAGTTCGA 7141 Query 17260 GCTGGTTGATGAATTCACTGCTTCAGAACGTGGAGACGGCGGATTTGGCCACACCGG 17316 | ||| ||||||| |||| |||| || |||| || || ||||| || || || Sbjct 7140 ACAGGTGAATGAATTTGTTGCTACAGAGCGCGGAGCAGGTGGTTTTGGACATACTGG 7084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238291410505480