Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq1499 325 6e-84 seq114 208 1e-48 >seq1499 Length=182485 Score = 325 bits (360), Expect = 6e-84 Identities = 485/685 (71%), Gaps = 10/685 (1%) Strand=Plus/Minus Query 172989 CAAAAAGCTTTAGCACAAGCTGAAATCATGATTAATCAGGAATATCAACCTGCTACCCCG 173048 ||||||||| | | | || || |||||||| ||||| ||||||||||| ||||||||| Sbjct 108043 CAAAAAGCTATCGAGTATGCAGAGATCATGATCAATCAAGAATATCAACCCGCTACCCCG 107984 Query 173049 ACATTCTCAAACGCTGGAAAACTTAAAGGT---GGTGAATTGGTATCATGTTTCTTAGAT 173105 || |||| ||||||||||| ||| || || |||||||| || |||||||| ||| Sbjct 107983 ACGTTCTTGAACGCTGGAAAG---AAACGTTCCGGCGAATTGGTTTCCTGTTTCTTGGAT 107927 Query 173106 GAAATCGGTGATT--CTAAAGTTGGAATATCCAAATCTATTCAAGCCGCATTGGATTTAT 173163 || ||||| ||| || || || || | | | | | || || | |||| Sbjct 107926 GAGATCGGCGATAACCTGAAC--GGTATTGGTTACGCGGTGGATTCGGCCATGAAATTAT 107869 Query 173164 CTTCGATGGGTGGAGGTGTATCGTTTAACGTATCTAAATTACGTGCACGTGGTGAAGCTA 173223 | || || ||||| || || || || || | || || | || ||||| |||||||| | Sbjct 107868 CATCTATTGGTGGTGGAGTGTCTTTCAATATTTCGAAGATCCGCGCACGCGGTGAAGCGA 107809 Query 173224 TTAAAGGAATCGACGGAAGAGCTTCAGGTGTTTTACCAGTAATGAAAATCCTTGAAGATG 173283 | ||||| | || || | || |||||| | || | ||||| ||| | |||||| Sbjct 107808 TCAAAGGGGTTGATGGCCGCGCAGGTGGTGTTCTTCCGATCATGAAGATCATGGAAGATA 107749 Query 173284 CTTTTTCATATGCTAATCAATTAGGACAACGTCCAGGTGCTGGAGCTGCTTATATCAATA 173343 | || || ||||| |||||||| ||||||||||| ||||| ||||||| ||| | |||| Sbjct 107748 CCTTCTCGTATGCCAATCAATTGGGACAACGTCCTGGTGCAGGAGCTGTCTATTTGAATA 107689 Query 173344 TCTTCCATTCAGATGTTGAAGAATTTCTAGATTCTAAGAAAATCAACGCTGACGAAAAAT 173403 ||||||| || || |||||||||| | |||| |||||||||||| | || || ||| Sbjct 107688 TCTTCCACTCGGACATTGAAGAATTCTTGGATTGTAAGAAAATCAATGTGGATGAGAAAG 107629 Query 173404 CACGTCTTAAATCGCTTTCGTTAGGTGTTATCGTTCCTGACAAATTCATGGAATTAGCTG 173463 |||| | || || | || | ||| | |||||||| || |||||||||||||| || | Sbjct 107628 TACGTATCAAGTCCTTATCTATCGGTATCATCGTTCCGGATAAATTCATGGAATTGGCAG 107569 Query 173464 AGAAGGATGAACCATTTTATGTTTTCTATCCATATACAGTTAAGAAAGAATACGGTAAAC 173523 |||| ||||| || | |||| | ||||||| |||| |||| | | || || ||| | Sbjct 107568 AGAAAGATGAGCCTTGTTATTTGATCTATCCGCATACGGTTATGCAGGAGTATGGTCAGT 107509 Query 173524 ATCTAGATGATTTGGATATCGATACAATGTATTCCGAATTAGTTTCTAATCCTAATGTTA 173583 | || ||||| |||||||| || |||||| ||| | | | || ||||| |||| Sbjct 107508 ACCTGGATGAGTTGGATATGGACGTGATGTATGATGAACTGATCACGAACCCTAACGTTA 107449 Query 173584 AGAAACGTAAGTTAAATGCTAGACGTATGTTAACTAAGATTGCACAAGTTCAGAAAGAAT 173643 | || || | ||||| | | ||||| || ||||||||| || ||||| | Sbjct 107448 AAAAGAAAAAAATCAATGCCCGTCACTTGTTAGTGAAAATTGCACAAACGCAAAAAGAGT 107389 Query 173644 CAGGTTATCCATATTTCTTCTTGAA 173668 | || || ||||| ||||||| || Sbjct 107388 CGGGATACCCATACATCTTCTTCAA 107364 Score = 311 bits (344), Expect = 1e-79 Identities = 637/935 (68%), Gaps = 30/935 (3%) Strand=Plus/Minus Query 178617 TAAAAAATATACTGCTGTAAACTGGAACAATCCAGATAACGATTATGCCCAAATGTTCTG 178676 |||| ||| ||| || ||||||||||| | || || ||||| ||||| |||||||| Sbjct 106285 TAAACAATTTACAGCCGTAAACTGGAATACACCGGACAACGACTATGCATTGATGTTCTG 106226 Query 178677 GGATCAAAATATTAAACAATTCTGGATCGATACAGAATATGTACCTTCTAACGATATAAC 178736 ||| |||||||| || |||||||||||||| ||||| | ||||| || ||||| Sbjct 106225 GGAACAAAATATCCGCCAGTTCTGGATCGATACGGAATACATTCCTTCCAAGGATATTGA 106166 Query 178737 TTCTTGGAAGTCGTTAGAACCTGAAATGAAGAAAACATACATGAGAGCTTTAGGAGGTCT 178796 | ||||| || || ||||| | || | || ||| ||||| ||| | Sbjct 106165 TAGCTGGAAAGGATTGAGTTGGGATATGAAAGAGTGTTATAAGAAAGCCTTAGGTGGTTT 106106 Query 178797 TACATTACTTGACACTTTACAAAGTCATACAGGTATGCCTAAGATCATAGATCATATCGA 178856 ||| | | || || | || || || || ||||||||||||||||| ||||||||||| Sbjct 106105 GACACTGTTGGATACCCTTCAGAGCCACACCGGTATGCCTAAGATCATCGATCATATCGA 106046 Query 178857 CTCTCTACAAAACAAAGCTGTATTATCGTATATGTGTATGATGGAAGCGATACATGCTAA 178916 || |||| ||||| |||||||||||||| |||||||||||||||||||| || || || Sbjct 106045 TTCCTTACAGAACAAGGCTGTATTATCGTACATGTGTATGATGGAAGCGATCCACGCCAA 105986 Query 178917 ATCATACTCAACGATATTTACAACAGTAGCTAATAAAGATGAAATCGATGAAATCTTTAG 178976 |||||| || || || ||||| || || ||| | | || ||| | || | || | Sbjct 105985 ATCATATTCGACCATTTTTACCACGGTTTCTACCACCAACGAGATCAACGATGTATTCGG 105926 Query 178977 TTGGAT----AACTACAAACCCTCAGATTCAATATAAAGCTAGTGTTATCGAT---TCTT 179029 |||| | | ||||| || | || |||||||| | |||||| || Sbjct 105925 TTGGGTTGCCCAGAACAAATTCT----TACAGTATAAAGCATCTACCATCGATAGCCATT 105870 Query 179030 ACTAT-CAAAAG-TTAGCAAATCCTGAAGTCGATCCAAAGGATTTATTCATGGGGTTAGC 179087 || | ||| | | || ||| ||| | ||| | || || ||||||| || || Sbjct 105869 ACCGTGCAATCGATAAGGAAAAGGTGACG--GAT---GAAGAATTGTTCATGGCCTTGGC 105815 Query 179088 TGCATCAGTAATGTTAGAATCATTTCTATTTTATTCTGGATTCTTTTTACCATTATATCT 179147 ||| || ||| |||| ||||| || || || || ||||||||||| | ||||||| | Sbjct 105814 TGCTTCGGTACTGTTGGAATCTTTCCTTTTCTACTCTGGATTCTTCCTGCCATTATGGTT 105755 Query 179148 TTCTGGTAACGGTAAGATGAAAGCTTCAGCTGATATCATTAAGAAAATCGTAGCTGATGA 179207 | ||| | || ||||| || || || |||||||| ||||| || || || ||||| Sbjct 105754 ATGTGGACAAGGACAGATGGTGGCCTCTGCCGATATCATCAAGAAGATTGTTGCCGATGA 105695 Query 179208 ATCTATTCATGGTGTATTCGTTGGATTACTTGCACAAGAAGTTTACAACACTTTCGATGA 179267 || || || || |||||||| ||||| | || || ||||| | || ||| | Sbjct 105694 GTCCATCCACGGAGTATTCGTAGGATTGATCGCGCAGGAAGT-------ATTTGCGAAGC 105642 Query 179268 TACTACA-AAGAAAGAATTAAAAGATGAACTGTTAAGAACTATT-TACAGTTTATACGAA 179325 | | | | ||| ||||| | ||| | | || || |||| || | | || ||| Sbjct 105641 TTCCAAACAAGGAAGAAGTGAAACAACGTTTCTT-AGCCTTATTGAACGATCTTTATGAA 105583 Query 179326 AACGAAGCTAAGTATACTGATTACATTTATACCGAAGTTGGATTATCTTCAGATGTAAAA 179385 || || || || || || | | ||||| | || || ||| | | || ||||| Sbjct 105582 AATGAGATCAAATACACCGAAGAATTGTATACGGTGGTAGGTTTAACAGCTGAGGTAAAG 105523 Query 179386 GAATACGTTAAATACAATGCTAATAAAGCTTTGATGAATCTTGGATTCGATCC-AGAATT 179444 ||||||||| ||||||| ||||||||| |||||||| | || || ||||| | || Sbjct 105522 GAATACGTTCGCTACAATGGTAATAAAGCCTTGATGAACTTAGGGTTTGATCCTATTTTT 105463 Query 179445 CACACATGGTGAAATAAATCCAATCGTATTGAATGGACTTAACACCGAAACAACTCAACA 179504 | | | | | ||||| || || ||||| || | |||||||| || || ||||| Sbjct 105462 GAAGTAAAG-CAGGTCAATCCGATTGTTTTGAACGGTTTGAACACCGAGACGACACAACA 105404 Query 179505 TGATTTCTTTTCTATGAAATCTACTAATTACGAAA 179539 |||||||| || | |||||| || || ||||||| Sbjct 105403 CGATTTCTTCTCGAAGAAATCGACGAACTACGAAA 105369 Score = 172 bits (190), Expect = 8e-38 Identities = 339/497 (68%), Gaps = 6/497 (1%) Strand=Plus/Minus Query 174673 AACCTAAATTCGATAAAACTAGTGAGTTATTCGAAGGTATCGAAATTCCAAGTTTACAAG 174732 |||||||| ||| || | || || |||| ||| ||| | ||||||| || ||| Sbjct 106835 AACCTAAAACCGACAAGGTGAAGGAATTGTTCGCAGGCATCCATATTCCAACCGTAGAAG 106776 Query 174733 ATTGGGTTGACTTAAAGGATGATGTAATGAATTACGGTATCTATCATGCATATCGTTTAG 174792 ||||| || |||| | | || | | |||||||||| ||||| || ||||| | Sbjct 106775 ATTGGACAAACCTAAAAGCACAGGTGGCGGAACACGGTATCTACCATGCTTACCGTTTGG 106716 Query 174793 CTATTGCACCTAACCAGTCAACAGCTTACATTATGTCAGCCACTCCTTCGATAATGCCAA 174852 | ||||| || ||||| || || ||||||| ||| || || |||| | ||||||| Sbjct 106715 CCATTGCTCCGAACCAATCTACTTCTTACATCATGAACGCGACGGCTTCTGTTATGCCAA 106656 Query 174853 TATCTGA--TCAAGTTGAAGTACGTGAATATGATCATTCGACAACCTTTTATCCTATGCC 174910 | || ||| | || || | || |||| || || || | || || ||||| Sbjct 106655 TCGTGGACATCA--TCGAGGTGAGAGAGTATGGAGATAGTACCACTTACTACCCAATGCC 106598 Query 174911 TGGAATGAACGATGATAACATGTTCTTCTATAAATCAGCATACGATATGGATCAGTTTAA 174970 | ||| |||||||| |||| || ||||| |||||||||||||||||| | || Sbjct 106597 TTATTTGACGAATGATAACTACTTCTACTTCAAATCGGCATACGATATGGATCAGATGAA 106538 Query 174971 GGTATTACGTTTAGTATCAGTTATTCAACGTCATATCGATCAAGGAATTTCATGTATTTT 175030 ||| || | | || || || |||||||| || || ||||| | || || || Sbjct 106537 GGTGTTGAAACTGATCTCGGTGATCCAACGTCACATTGACCAAGGGGTATCGACGATCTT 106478 Query 175031 ACATACAAATTCTGAAGATGATACCGCATTAAT-GGCAAGATATTACATCTACGCTTGGA 175089 || || ||||| | ||| |||| | | | | ||| | ||||||||||||||| | Sbjct 106477 GCACACGAATTCAAAGGATTCTACC-CGTGACTTGGCGAAATATTACATCTACGCCCATA 106419 Query 175090 AGATGAAACTGAAATCGTTGTATTATACACGAACTCGTAAATCCTCTATTGACGGATGTA 175149 | || | | |||||| |||| ||||| || || |||||||| ||||||| | ||||| Sbjct 106418 AACTGGGATTAAAATCGCTGTACTATACCCGTACGCGTAAATCAACTATTGAAGAATGTA 106359 Query 175150 TATCCTGTTCAGCTTAA 175166 | || |||||||| ||| Sbjct 106358 TTTCTTGTTCAGCATAA 106342 >seq114 Length=395947 Score = 208 bits (230), Expect = 1e-48 Identities = 410/599 (68%), Gaps = 17/599 (3%) Strand=Plus/Plus Query 139425 TTACAAGAAATAGAAAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCAT 139484 |||||| | ||| ||||||||||| || |||||||| ||||| ||| | |||||||| | Sbjct 385796 TTACAA-ACATATGAAAGGAATTATATTGGCAGGTGGATCTGGAACCAGATTGCATCCTT 385854 Query 139485 TGAC--TATCAGTGTTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTA 139542 |||| || | ||| | || || ||| | ||||| || ||||| ||||||||||| || Sbjct 385855 TGACCCTAGCCGTGAGT--AAGCAATTAATGCCTGTTTATGATAAGCCAATGATTTATTA 385912 Query 139543 TCCATTGACAACTCTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACA 139602 ||| ||| | || ||| | || || ||||| |||||| | || ||||| || || || Sbjct 385913 TCCCTTGTCTACACTTTTATTGGCAGGGATAAAAGAAATATTGATTATATCTACCCCCCA 385972 Query 139603 GGATAGAAATTCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGA 139662 ||| | | ||| ||||| ||| | || | ||| | | |||| | | | || Sbjct 385973 AGATTTACCTCATTTTGAGAAATTATTGGGCGATGGTAGCCGAATTGGCTGTCGTTTTGA 386032 Query 139663 ATACGCTGTTCAAGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATT 139722 ||| | ||| || || |||| || ||||| |||||| || | ||||||||||| Sbjct 386033 ATATAAAGAACAACCAAGTCCGGATGGATTGGCACAGGCTTTCATTCTGGGTGAAGAATT 386092 Query 139723 CATAGGTAAATCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCTAATAT 139782 || || | ||| ||||| | ||||| ||||| || ||||| ||| || || Sbjct 386093 TATCGGAGACGATAAGGTAGCCTTAATTTTGGGTGATAATATTTTTTATGGATCGGGCAT 386152 Query 139783 AGATAGATTACTTATGGAAGCTAATATGTCTGATAAAAAT----ACGA--TATTTGCATA 139836 || |||| || || | | || | || ||| | | | ||||| || Sbjct 386153 GTCTAAATTA---TTGCAA--TCCTGTG-CAGACCCGAATGGTGGCTATGTTTTTGCTTA 386206 Query 139837 TCGTGTAAATGATCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGT 139896 || || | |||||| | | ||||| || || ||||| ||| || || |||| || Sbjct 386207 TCCAGTTCACGATCCTGAACGTTATGGCGTCGTGGAATTTGATAAAGATAGAAACGTGGT 386266 Query 139897 TTCGATCGAAGAAAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTT 139956 ||| || |||||||||||||| | || ||||| || || || || ||||| |||||||| Sbjct 386267 TTCTATTGAAGAAAAACCTTTAGAGCCAAAATCCAACTATGCTGTTCCAGGATTATATTT 386326 Query 139957 CTATAATAACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAAT 140015 |||| |||| ||||| | || | ||||| | ||| || ||||| |||||| |||| Sbjct 386327 CTATGATAATGATGTGTTAGAGATTGCTAAAAATATAAAGCCTTCTCATCGTGGGGAAT 386385 Score = 114 bits (126), Expect = 2e-20 Identities = 270/394 (69%), Gaps = 19/394 (5%) Strand=Plus/Plus Query 138061 TTTTCAAAACTTAT-GACATTGATACTGTGGTACATTTTGCTGCTGAATCACATGTCGAT 138119 ||||| | || ||| ||| | ||| ||| | ||||| || || ||||| ||||||||| Sbjct 383646 TTTTCCATACCTATAGACCT-GATGGTGTAATTCATTTGGCAGCAGAATCGCATGTCGAT 383704 Query 138120 AATTCGATTTCTAATCCTGACAT-ATTCGTTTTAGCTAATGTCAAAGGTACTGTCGATTT 138178 ||| ||| |||||||| ||| ||| || | ||||||| | || || || |||| Sbjct 383705 CGTTCCATTACTAATCCT-ACAGCATTTGTGATGACTAATGTGATCGGGACAGTGAATTT 383763 Query 138179 ATTGAATGTTGCTAAGAATTATTGG---GCTGATCGTAAAGATGTAATATTCCATCATGT 138235 | |||| || || ||| ||| | |||| | ||| | | ||||||| ||||| Sbjct 383764 GCTAAATGCAGCCAAAGATTTATGGAAAGATGATTTTGAAGGTAAATTATTCCACCATGT 383823 Query 138236 TTCAACCGATGAAGTATTTGGGGCTCTTGGAATGGAA--GGTTCATTTAACGATGATTCT 138293 ||| ||||||||||||| ||| | | ||| | || |||| ||||| || || | Sbjct 383824 TTCTACCGATGAAGTATATGGAACATTGGGA--GAAACGGGTTTATTTACGGAAGAAACC 383881 Query 138294 AATTACGACCCACATTCACCTTATTCAGCTTCAAAAGCTGCAAGTGATATGTTCGTTAAA 138353 ||||| |||||||| || |||||||| |||||||| || ||| || || | Sbjct 383882 GCATACGATCCACATTCCCCATATTCAGCGTCAAAAGCGTCATCTGACCATTTTGTCCGA 383941 Query 138354 GCTTATGCTACGACTTAC-AATATGTTA-GTATCGATTT--CTAATTGTTCAAATAACTT 138409 || || | | || ||| || |||| ||||| ||| | |||||||||||||| | Sbjct 383942 GCCTA--CCATGA--TACGTATGGGTTACCTATCGTTTTGACAAATTGTTCAAATAATTA 383997 Query 138410 CGGACCATATCAACACAAGGAAAAACTGATTCCA 138443 || || |||| ||||||||||||||| Sbjct 383998 TGGTCCCAATCATTTTCCTGAAAAACTGATTCCA 384031 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 138225 TTCCATCATGTTTCAACCGATGAAGTATTTGGGGCTCTTGGAATGGAAGGTTCATTTAAC 138284 ||||| ||| |||| |||||||| |||||||| ||||| ||| |||| || | | Sbjct 373526 TTCCACCATATTTCTACCGATGAGGTATTTGGCGCTCTGGGAGAAAAAGGGCTTTTCACC 373585 Query 138285 GATGATTCTAATTACGACCCACATTCACCTTATTCAGCTTCAAAAGCTGCA 138335 || || | || ||||| || |||||||||||||| || ||||||||| || Sbjct 373586 GAAGAAACCAAATACGATCCCCATTCACCTTATTCTGCCTCAAAAGCTTCA 373636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700281139105920