Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq97077 91.5 1e-13 seq79280 82.4 5e-11 seq2059 82.4 5e-11 >seq97077 Length=2523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 45234 ATGCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCGTAGGTTCG 45293 |||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||| Sbjct 2410 ATGCGCCCGTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTTGGTCGAAGGTTCG 2351 Query 45294 AATCCTACAGGGCGTGCCAT 45313 |||||| | ||| | ||||| Sbjct 2350 AATCCTTCCGGGTGCGCCAT 2331 >seq79280 Length=4541 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 38064 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGGTGGTCGGTGGTTCGAGTCCACCT 38123 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 4368 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCGAGCCCAGCT 4427 >seq2059 Length=160093 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 38064 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGGTGGTCGGTGGTTCGAGTCCACCT 38123 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 4082 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCGAGCCCAGCT 4141 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 38064 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGGTGGTCGGTGGTTCGAGTCCACCT 38123 ||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 4522 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCGAGCCCAGCT 4581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355910875717732