Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq5 141 1e-28 seq51 104 3e-17 seq76955 91.5 2e-13 seq7 89.7 8e-13 seq101083 84.2 3e-11 seq97077 84.2 3e-11 seq29819 84.2 3e-11 >seq5 Length=869209 Score = 141 bits (156), Expect = 1e-28 Identities = 465/716 (65%), Gaps = 14/716 (2%) Strand=Plus/Minus Query 119793 TCATAGAAGTCTTCATACAACCGACCGCA-ATCAACGTCAGGGCTGAATAGGGTGATATA 119851 ||| ||||| | ||||||| || | ||| |||| | |||||||| | ||||||||| Sbjct 711252 TCAAAGAAGGCATCATACAGCCC-CGGCACATCAGAG---GGGCTGAACAAGGTGATATA 711197 Query 119852 CCCATCATCACGCAACCTCTCTAGAAACAGCTTATTGATATGCACACTGTAATCAAGACC 119911 |||| | | || | || | ||| || | ||||| | || || ||| Sbjct 711196 GTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATG 711137 Query 119912 CCGGATCCGGGTTTCATCAGTACCCTTGTTATTCTTCAATACAAGCAGTTTCTCAACCTC 119971 || | |||| | || || ||| |||||| |||| ||| ||||| || || || Sbjct 711136 CCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTC 711077 Query 119972 CAAATGCCACATAGGGTAATTCAGAGTAGCAGAGCCGCCACGTAGAGCACCTTGCGAACA 120031 || |||||||| ||||| ||| || || | || ||||| | | | |||||||| || Sbjct 711076 CAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCA 711017 Query 120032 GCTCTTAACCGCAGTATGGAAGTGCTTGTAGAATGGGATTACGCCGGTATGGGTTGCTTC 120091 ||| || || || || ||||| ||||| || || ||||| ||| ||||| ||||| Sbjct 711016 GCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTC 710957 Query 120092 GCCGTTGCGAATTGGTGAACCCTCCGCACGAATAGCACCAGCATTAATACCAATACCAGC 120151 ||| || || ||||| ||| || |||||| || || |||||||||||||| || Sbjct 710956 GCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGC 710897 Query 120152 ACGTTGACTGATATAACTAATAATAGATGCAGACGTATCGTTAATAGATTTCAGAGAATC 120211 || || | || | | ||| | || || | || || || | ||| || Sbjct 710896 GCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTC 710837 Query 120212 GCCGGATTCAATTTTCACACACGAACTAAATTGGCGCGTTGGGGTGCGGGCACCACCCAA 120271 || | ||||| || || || || || || || |||||||| || | || || Sbjct 710836 ACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACAT 710777 Query 120272 AATAGGGGTTGGGATTGAAATCTTAAATAGAGAAGCCGCATTATAATAATTGATTACGTG 120331 |||||| || || | |||||||||||| || || | ||||| ||| | | || | Sbjct 710776 AATAGGTGTCGGCAGTGAAATCTTAAACAGCGACGTCGCATCATAGAAGCGGCGCACATA 710717 Query 120332 TTGAAGTCGGTTTACTTTT----TCACT--CTGATGTAGAGCCATAGCAATTCCCATATA 120385 | || ||| | || || | | | | || | || | |||| |||||| Sbjct 710716 GTCCAGCCGG-GTGCTCTTCGGGTAATTGGCAAATAAACAGGC--GGCAACCAGCATATA 710660 Query 120386 AAGGAATTGGGGGGTTTCGTACATCTCCTTAGTTACTCTATTTCGTACCAAGTACTTTTC 120445 ||||| |||| | |||| || ||||| ||||| | ||| |||||| || || | Sbjct 710659 GAGGAACTGGGCGCTTTCATAAATCTCACCGGTTACCCGGTTTTGTACCAGATATTTACC 710600 Query 120446 TTTTAACTGCATTGCACCAGCATATGTAAAATTCATATCTCGGGAATGGTCAATAT 120501 || |||||| | | ||||||| | ||||||| ||| ||| |||||| |||| Sbjct 710599 TTCCAACTGCTTAACGGCAGCATAACTGAAATTCAGATCGCGGCTATGGTCGATAT 710544 >seq51 Length=473680 Score = 104 bits (114), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 198935 GGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAG 198994 |||||| |||||||||||||||||||| ||||||||||||| | |||| |||||||||| Sbjct 469228 GGCCCCATAGCTCAGTTGGTTAGAGCACTCGACTCATAATCGATCGGTCGCTGGTTCGAG 469287 Query 198995 TCCAGTAGGGGCCACCA 199011 ||||| |||||||||| Sbjct 469288 TCCAGCTGGGGCCACCA 469304 >seq76955 Length=4939 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 198934 TGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGA 198993 |||||||||||||||||||||||||||| ||||||||||||| | |||| | |||| | Sbjct 748 TGGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCCCAGTTCAA 807 Query 198994 GTCCAGTAGGGGCCACCA 199011 ||| | ||||||||||| Sbjct 808 GTCTGGGAGGGGCCACCA 825 >seq7 Length=747525 Score = 89.7 bits (98), Expect = 8e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 ||||||||| |||||| |||||||||| ||||||||| ||| ||||| ||||||| | Sbjct 439729 TCGGTGATTGGCGCAGCTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAA 439670 Query 199840 GTCCTGTATCACCGACCACTT 199860 ||||| |||||||||||||| Sbjct 439669 ATCCTGCATCACCGACCACTT 439649 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 ||||||||| |||||| |||||||||| ||||||||| ||| ||||| ||||||| | Sbjct 440107 TCGGTGATTGGCGCAGCTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAA 440048 Query 199840 GTCCTGTATCACCGACCACTT 199860 ||||| ||||||||||| || Sbjct 440047 ATCCTGCATCACCGACCATTT 440027 >seq101083 Length=2117 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 198942 TAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGAGTCCAGTA 199001 |||||||||||||||||||||| ||||||||||| ||||||| | |||| |||| | Sbjct 2109 TAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAGTCACGGT 2050 Query 199002 GGGGCCACCAGATAAA 199017 ||| |||||| ||||| Sbjct 2049 GGGCCCACCATATAAA 2034 >seq97077 Length=2523 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 |||| ||||||||||| |||||||||| ||||||||| ||| ||||| ||||||| | Sbjct 2098 TCGGCGATTAGCGCAGTTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAA 2039 Query 199840 GTCCTGTATCACCGACCACTT 199860 ||||| ||| |||||||||| Sbjct 2038 ATCCTGCATCGCCGACCACTT 2018 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 199781 TCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGA 199839 |||| ||||||||||| |||||||||| ||||||||| ||| ||||| ||||||| | Sbjct 2217 TCGGCGATTAGCGCAGTTTGGTAGCGCACTTGGTTTGGGTCCAAGGGGTCGCAGGTTCAA 2158 Query 199840 GTCCTGTATCACCGACCACTT 199860 ||||| ||| |||||||||| Sbjct 2157 ATCCTGCATCGCCGACCACTT 2137 >seq29819 Length=16985 Score = 84.2 bits (92), Expect = 3e-11 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 198686 ACCACG-GGATGTGGTGAAATTGGCAGACACACTAGATTTAGGTTCTAGCGCC-ATAGGC 198743 |||||| ||| ||||||||||||| |||||||| ||||||||||||| ||||| ||| Sbjct 14308 ACCACGCGGACGTGGTGAAATTGGTAGACACACCAGATTTAGGTTCTGGCGCCGCAAGGT 14367 Query 198744 GTGACGGTTCGAGTCCGTCCATCCCGACCA 198773 |||| ||||||||| ||| ||| |||| Sbjct 14368 GTGAGAGTTCGAGTCTCTCCGTCCGCACCA 14397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739779151123680