Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019706.1 Length=42780 Score E Sequences producing significant alignments: (Bits) Value seq14312 271 2e-68 >seq14312 Length=42616 Score = 271 bits (300), Expect = 2e-68 Identities = 402/569 (71%), Gaps = 2/569 (0%) Strand=Plus/Minus Query 5198 CAGCCGCATATTCATGCGGGCAATGGTAACTTCGTCGCGGATGGTATTCGCCAGGCACTG 5257 ||||| ||| ||| || ||||| |||||| |||||| ||| | ||| | | Sbjct 17493 CAGCCACATCTTC--GCTGGCAACGGTAACCTCGTCGGTGATTCCGTCCGCGCTTCCGTC 17436 Query 5258 ATGGCGCGTGCCGGGTTCGAAGGTCAGGAGCGGGATAACGTTTATAACGGTATGACGCTG 5317 |||| |||||||| |||| | ||| | || ||| |||||| |||| ||| Sbjct 17435 CTGGCTCGTGCCGGCCTCGAGGAGCAGCACACCGACAACCGCTATAACTTCATGAGCCTG 17376 Query 5318 CGCGAGTATGCGCGTATGGCCCTGACTGAAAAAGGTATCGGCGTGGCCAGCTACAACCCG 5377 |||||| || || ||||| | || || || ||||| |||||| |||||| Sbjct 17375 CGCGAGCTGGCCCGCGCTTCCCTGGCGGATCGCGGCATTGGCGTCGCCAGCATGAACCCG 17316 Query 5378 ATGCAGATGGTTGGCCTGGCGCTGACCCACAGCACCTCTGACTTTGGCAACATTCTGCTT 5437 ||||||||||| |||||||| | ||||||| |||| ||||| |||| ||| ||| | Sbjct 17315 ATGCAGATGGTCGGCCTGGCTTTCACCCACACCACCAGCGACTTCGGCACCATCCTGATC 17256 Query 5438 GATGTTGCGAACAAAGCGCTGATTCAGGGCTGGGACGAGGCGCAGGAAACCTTCGAACAG 5497 ||||| || ||| | || || | ||||||||| ||||||| |||||||||| | | Sbjct 17255 GATGTGGCCAACCGATCGATGCTGGCGGGCTGGGAGGAGGCGCTGGAAACCTTCCAGCTC 17196 Query 5498 TGGACCAAAAAAGGCCAGCTGTCGGACTTCAAAACGGCGCATCGTGTCGGCATGGGTGGT 5557 ||||| ||||| ||| ||||| |||||||| || ||| || |||||| |||||| Sbjct 17195 TGGACGAAAAAGGGCTTCCTGTCCGACTTCAAGACCATGCACCGCGTCGGCCTGGGTGAG 17136 Query 5558 TTCCCTTCTCTGCGACAGGTTCGCGAAGGGGCTGAGTACAAGTACATCACTACCAGTGAC 5617 || || || ||||| ||||||||||| || || |||||||||||| | ||| ||| | Sbjct 17135 TTTCCGTCCCTGCGCCAGGTTCGCGAGGGCGCCGAGTACAAGTACGTGACTGTTGGTGGC 17076 Query 5618 AAAGGCGAAACCATCGCGCTTGCCACGTATGGTGAAATCTTCTCAGTAACCCGCCAGGCG 5677 | | || || || ||||| || || || || ||| | |||||||||| Sbjct 17075 CGCTCTCAGCCGATTGCCCTGGCCACCTACGGCGAGATTTTCAGCATCACCCGCCAGGTC 17016 Query 5678 ATCATCAACGACGATCTGAACCAGCTTACCGACGTACCGATGAAGATGGGGCGCGCGGCG 5737 ||||||||||| || ||||| ||| |||||| | ||| |||||||| ||||| Sbjct 17015 ATCATCAACGATGACATGAACATGCTCACCGACATCCCGCGCAAGATGGGCATGGCGGCC 16956 Query 5738 AAAGCAACGATTGGCGATCTGGTTTACGC 5766 || || || || || |||||||||||||| Sbjct 16955 AAGGCCACCATCGGTGATCTGGTTTACGC 16927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136481661409744