Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq11269 123 6e-24 >seq11269 Length=54388 Score = 123 bits (136), Expect = 6e-24 Identities = 211/299 (71%), Gaps = 13/299 (4%) Strand=Plus/Plus Query 5276 CATCGACTGGGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCCTGGCGAA 5335 ||||||||||||| ||| || || ||||| ||| | | |||||| ||| | | | Sbjct 17656 CATCGACTGGGCGCTGATCGAGCTGACCAAGGACGCCGAGAACCGCTACATCATCGGCAG 17715 Query 5336 CCC----AGCGGCCCTGACTGGCCCTACCCTTTGGGGCCTGCCGGTGGTAGCAACCGAAG 5391 ||| | |||| | ||| || ||||| ||| | |||||||||| | |||| | | Sbjct 17716 CCCGCAGAACGGCACC-ACT---CCGACCCTCTGGCGTTTGCCGGTGGTGGAAACCCAGG 17771 Query 5392 CCGCAGCATTCCAGGGCAAGTTCCTGACCGGTGCATTCAACGCTGCG-GCACAGCTGTTT 5450 || | || || ||| | ||||||||||||| || ||| |||| | || ||| | || Sbjct 17772 CC--ATCACTC-AGGACGAGTTCCTGACCGGAGCTTTCT-CGCTCGGCGCCCAGATCTTC 17827 Query 5451 GACCGTGAAGACGCCAACGTGGTGATCTCCACTGAGAACGCCGACGACTTTGAGAAAAAC 5510 ||||| || | | || || ||||||| ||||||| | | ||||| ||||| ||| Sbjct 17828 GACCGCATGGATATCGAGGTTCTGGTCTCCACCGAGAACGACAAGGACTTCGAGAACAAC 17887 Query 5511 ATGATCTCGATTCGCTGTGAAGAGCGTCTGGCCCTGGCGGTGAAACGCCCTGAGGCGTT 5569 ||| | | || ||| ||||||||| |||||| | ||||| | || ||||||||||| Sbjct 17888 ATGGTAACCATCCGCGCTGAAGAGCGACTGGCCTTCGCGGTCTATCGGCCTGAGGCGTT 17946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119925173308824