Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019713.1 Length=78751 Score E Sequences producing significant alignments: (Bits) Value seq96199 132 2e-26 seq5 129 3e-25 >seq96199 Length=2664 Score = 132 bits (146), Expect = 2e-26 Identities = 554/866 (64%), Gaps = 19/866 (2%) Strand=Plus/Plus Query 52764 AAGAGGAAATTA-TGCAACAATACCTCGCATTAGCACAGCGCATCATTGACGAGGGTGTG 52822 ||||| |||| | || |||| || | | ||| ||||| || ||||||| |||||| Sbjct 1750 AAGAGCAAATCAATGAAACAGTATTTAGATTTATGTCAGCGTATTGTTGACGAAGGTGTG 1809 Query 52823 CTAGTAGAGAACCAGCGTACCGGGAAGAAGTGCCTAACGGTAATCAACGCAGACCTTACC 52882 || |||||| | || || || | || || |||| ||||| || || || ||| Sbjct 1810 TGGGTTGAGAACAAACGCACAGGAACCAAATGTTTAACCGTAATTAATGCCGATCTTGAA 1869 Query 52883 TA--------CAACCAACTA----CCCTTAGTAACAACCCGCAAGAGCTTCTGGAAAGCA 52930 || ||| ||| | || | | || || || |||||||| | ||||| Sbjct 1870 TATGATGTGGCAAATAACAAGTTTCCGCTCATCACCACGCGAAAGAGCTTTTACAAAGCG 1929 Query 52931 GCTGTAGCCGAACTGCTTGGGTACATTCGTGGATACAGCAGTGCCGAAGATTTCCGAAAG 52990 || |||| || | || || || | ||||| ||| ||| || | | | || || | Sbjct 1930 GCGATAGCGGAGTTACTGGGTTATTTACGTGGTTACGACAGCGCTGCACAGTTTCGTGAT 1989 Query 52991 CTGGGAACCACCACTTGGGACGCTAACGCCAACAAGAATGAAGCTTGGCTTAATAACCCG 53050 | || | |||||| | || ||||| ||| |||| |||| |||||| | || ||| Sbjct 1990 ATCGGCTGTATGACTTGGAATGCCAACGCGAACGAGAACAAAGCGTGGCTTGAAAATCCG 2049 Query 53051 TACCGCGTGGGCAATGACCACATGGGGCGTGTTTACGGTGTGCAGGGACGATCTTGGGCT 53110 | || || | || | ||||| ||||| || ||||| || || || |||| | Sbjct 2050 CATCGTAGTGGTGAGGATGATATGGGCCGTGTGTATGGTGTTCAAGGGCGCAGTTGG-CA 2108 Query 53111 AAGCCG-GATGGCGGTACTGTGGACCAGCTCAAGAAGATTGTGGATAATCTTA-CTAACG 53168 | ||| ||||| | | || ||||| || || || | ||||| |||| | || | Sbjct 2109 ACGCCCTGATGGTAGCCACCTTGATCAGCTTAAAAAAGTTATCGATAA-CTTATCGAAAG 2167 Query 53169 GTATCGACGACCGTGGGGAGATCCTGAACTTCTACAACCCGGGCGAGTTCCACATGGGAT 53228 | || || || || || || ||| | | || || || || || || || | | || | Sbjct 2168 GAATTGATGATCGCGGTGAAATCGTCACTTTTTATAATCCAGGTGAATTTGAGCTAGGTT 2227 Query 53229 GCCTACGCCCGTGCATGTACAGCCACCACTTCTCACTGCTAGGAGACACCCTGTATCTCA 53288 | ||||||| || ||| ||| ||| ||| || || | || || || | || || | Sbjct 2228 GTTTACGCCCTTGTATGCACACGCACACCTTTTCTTTGTTGGGCGATACTTTATA-CTTA 2286 Query 53289 ACAGCACAC-AACGCTCTTGTGATGTACCTTTGGGTCTGAACTTCAACATGGTTCAGGTG 53347 ||| || || |||| |||||||| || ||||||||||||| || |||| Sbjct 2287 ACATCATACCAACGTAGCTGTGATGTGCCGCTGGGTCTGAACTTTAATCAAATTCAATGT 2346 Query 53348 TACGTGTTCCTAGCGATCATGGCTCAAATCACCGGGCACAAGATGGGCACCGCGCACCAC 53407 | ||||| || || | | || ||||| ||||| || || ||| | ||| | || Sbjct 2347 TTTGTGTTACTTGCTTTAGTTGCACAAATAACCGGACATAAACCGGGTAAGGCGTATCAT 2406 Query 53408 AAGATCGTGAACGCTCATATCTACGAAGACCAGATAGATCTCATGCGCGACGTACAGTTA 53467 || || | ||| || ||||| || ||| |||| | || | ||||| || ||||| | Sbjct 2407 AAAATAGCGAATGCGCATATTTATGAAAACCAACTTGAGTTGATGCGTGATGTACAACTT 2466 Query 53468 ACCCGAGAGCCGCTAGACCCACCCGTGTTGTGGATCAACCCGGACATCAAGACACTAGAA 53527 | |||||||| | | | || | || || ||||| | || || || ||||| Sbjct 2467 AAGCGAGAGCCTTTCGCGTCGCCAGAATTAAAAATAAACCCAAATATTAAATCATTAGAA 2526 Query 53528 GACTTGGAGACTTGGGTAACACTGGACGACTTTGATGTCTTTGGCTACAAACACCATGAT 53587 ||| | || | ||||| ||| || || ||||| || | || || | || ||| Sbjct 2527 GACATTGAAAGCTGGGTTACAAAAGATGATTTTGAAGTAGTAGGTTATCAGTGTCACGAT 2586 Query 53588 CCAATAAAATATCCATTCACTGTTTA 53613 |||| || ||||| || | ||||| Sbjct 2587 GCAATTAAGTATCCGTTTTCAGTTTA 2612 >seq5 Length=869209 Score = 129 bits (142), Expect = 3e-25 Identities = 345/525 (66%), Gaps = 2/525 (0%) Strand=Plus/Plus Query 52925 AAAGCAGCTGTAGCCGAACTGCTTGGGTACATTCGTGGATACAGCAGTGCCGAAGATTTC 52984 |||||||| | || ||| || | || ||| | | || || |||||||| | | ||| Sbjct 100031 AAAGCAGCGATTGCTGAATTGTTAGGATACTTAAGGGGTTATGACAGTGCCGCACAATTC 100090 Query 52985 CGAAAGCTGGGAACCACCACTTGGGACGCTAACGCCAACAAGAATGAAGCTTGGCTTAAT 53044 || | || | || ||| | || || |||||| | ||| | || ||| | || Sbjct 100091 CGTGCTATCGGTTGTAATACCTGGAATGCGAATGCCAACGAAAATCAGGCCTGGTTAGAT 100150 Query 53045 AACCCGTACCGCGTGGGCAATGACCACATGGGGCGTGTTTACGGTGTGCAGGGACGATCT 53104 |||||| | || ||| | || | ||||| || || || |||||||| || || | Sbjct 100151 AACCCGCATCGTAAGGGTGAAGATGATATGGGCCGGGTATATGGTGTGCAAGGCCGGCGT 100210 Query 53105 TGGGCTAAGCCGGATGGCGGTACTGTGGACCAGCTCAAGAAGATTGTGGATAATCTTACT 53164 ||| ||||| |||||| ||| | || || || || || || || || | Sbjct 100211 TGGCAGAAGCCCGATGGCTCAACTTTAGATCAACTGGCAAAAATCGTCAGCAACCTGAGC 100270 Query 53165 AACGGTATCGACGACCGTGGGGAGATCCTGAACTTCTACAACCCGGGCGAGTTCCACATG 53224 || || |||||||| |||| |||||||||| ||| || ||||| || ||||| | | Sbjct 100271 AAGGGGATCGACGATCGTGCCGAGATCCTGACCTTTTATAACCCTGGTGAGTTTGAACTT 100330 Query 53225 GGATGCCTACGCCCGTGCATGTACAGCCACCACTTCTCACTGCTAGGAGACACCCTGTAT 53284 || || || || || || ||| | | ||| ||| | || ||||| | |||||| Sbjct 100331 GGTTGTCTGCGGCCCTGTATGCATACCCATACCTTTAGTTTACTGGGAGATAAGCTGTAT 100390 Query 53285 CTCAACAGCACA-CAACGCTCTTGTGATGTACCTTTGGGTCTGAACTTCAACATGGTTCA 53343 || | | | | ||||| ||||||||||| |||| ||||| || || ||| || Sbjct 100391 CTGA-CGTCTTATCAACGTAGCTGTGATGTACCGCTGGGACTGAATTTTAATCAGGTACA 100449 Query 53344 GGTGTACGTGTTCCTAGCGATCATGGCTCAAATCACCGGGCACAAGATGGGCACCGCGCA 53403 | |||||| || || | ||||| ||||||||||| ||||| ||| | || | Sbjct 100450 ATGTTTCGTGTTACTGGCACTTATGGCGCAAATCACCGGCCACAAAGCGGGTAAGGCCTA 100509 Query 53404 CCACAAGATCGTGAACGCTCATATCTACGAAGACCAGATAGATCT 53448 ||| || || | || ||||| | |||||| | ||| | || || Sbjct 100510 CCATAAAATTGCCAATGCTCACGTTTACGAAAATCAGCTGGAGCT 100554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 251325117294752