Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_019713.1
Length=78751
Score E
Sequences producing significant alignments: (Bits) Value
seq96199 132 2e-26
seq5 129 3e-25
>seq96199
Length=2664
Score = 132 bits (146), Expect = 2e-26
Identities = 554/866 (64%), Gaps = 19/866 (2%)
Strand=Plus/Plus
Query 52764 AAGAGGAAATTA-TGCAACAATACCTCGCATTAGCACAGCGCATCATTGACGAGGGTGTG 52822
||||| |||| | || |||| || | | ||| ||||| || ||||||| ||||||
Sbjct 1750 AAGAGCAAATCAATGAAACAGTATTTAGATTTATGTCAGCGTATTGTTGACGAAGGTGTG 1809
Query 52823 CTAGTAGAGAACCAGCGTACCGGGAAGAAGTGCCTAACGGTAATCAACGCAGACCTTACC 52882
|| |||||| | || || || | || || |||| ||||| || || || |||
Sbjct 1810 TGGGTTGAGAACAAACGCACAGGAACCAAATGTTTAACCGTAATTAATGCCGATCTTGAA 1869
Query 52883 TA--------CAACCAACTA----CCCTTAGTAACAACCCGCAAGAGCTTCTGGAAAGCA 52930
|| ||| ||| | || | | || || || |||||||| | |||||
Sbjct 1870 TATGATGTGGCAAATAACAAGTTTCCGCTCATCACCACGCGAAAGAGCTTTTACAAAGCG 1929
Query 52931 GCTGTAGCCGAACTGCTTGGGTACATTCGTGGATACAGCAGTGCCGAAGATTTCCGAAAG 52990
|| |||| || | || || || | ||||| ||| ||| || | | | || || |
Sbjct 1930 GCGATAGCGGAGTTACTGGGTTATTTACGTGGTTACGACAGCGCTGCACAGTTTCGTGAT 1989
Query 52991 CTGGGAACCACCACTTGGGACGCTAACGCCAACAAGAATGAAGCTTGGCTTAATAACCCG 53050
| || | |||||| | || ||||| ||| |||| |||| |||||| | || |||
Sbjct 1990 ATCGGCTGTATGACTTGGAATGCCAACGCGAACGAGAACAAAGCGTGGCTTGAAAATCCG 2049
Query 53051 TACCGCGTGGGCAATGACCACATGGGGCGTGTTTACGGTGTGCAGGGACGATCTTGGGCT 53110
| || || | || | ||||| ||||| || ||||| || || || |||| |
Sbjct 2050 CATCGTAGTGGTGAGGATGATATGGGCCGTGTGTATGGTGTTCAAGGGCGCAGTTGG-CA 2108
Query 53111 AAGCCG-GATGGCGGTACTGTGGACCAGCTCAAGAAGATTGTGGATAATCTTA-CTAACG 53168
| ||| ||||| | | || ||||| || || || | ||||| |||| | || |
Sbjct 2109 ACGCCCTGATGGTAGCCACCTTGATCAGCTTAAAAAAGTTATCGATAA-CTTATCGAAAG 2167
Query 53169 GTATCGACGACCGTGGGGAGATCCTGAACTTCTACAACCCGGGCGAGTTCCACATGGGAT 53228
| || || || || || || ||| | | || || || || || || || | | || |
Sbjct 2168 GAATTGATGATCGCGGTGAAATCGTCACTTTTTATAATCCAGGTGAATTTGAGCTAGGTT 2227
Query 53229 GCCTACGCCCGTGCATGTACAGCCACCACTTCTCACTGCTAGGAGACACCCTGTATCTCA 53288
| ||||||| || ||| ||| ||| ||| || || | || || || | || || |
Sbjct 2228 GTTTACGCCCTTGTATGCACACGCACACCTTTTCTTTGTTGGGCGATACTTTATA-CTTA 2286
Query 53289 ACAGCACAC-AACGCTCTTGTGATGTACCTTTGGGTCTGAACTTCAACATGGTTCAGGTG 53347
||| || || |||| |||||||| || ||||||||||||| || ||||
Sbjct 2287 ACATCATACCAACGTAGCTGTGATGTGCCGCTGGGTCTGAACTTTAATCAAATTCAATGT 2346
Query 53348 TACGTGTTCCTAGCGATCATGGCTCAAATCACCGGGCACAAGATGGGCACCGCGCACCAC 53407
| ||||| || || | | || ||||| ||||| || || ||| | ||| | ||
Sbjct 2347 TTTGTGTTACTTGCTTTAGTTGCACAAATAACCGGACATAAACCGGGTAAGGCGTATCAT 2406
Query 53408 AAGATCGTGAACGCTCATATCTACGAAGACCAGATAGATCTCATGCGCGACGTACAGTTA 53467
|| || | ||| || ||||| || ||| |||| | || | ||||| || ||||| |
Sbjct 2407 AAAATAGCGAATGCGCATATTTATGAAAACCAACTTGAGTTGATGCGTGATGTACAACTT 2466
Query 53468 ACCCGAGAGCCGCTAGACCCACCCGTGTTGTGGATCAACCCGGACATCAAGACACTAGAA 53527
| |||||||| | | | || | || || ||||| | || || || |||||
Sbjct 2467 AAGCGAGAGCCTTTCGCGTCGCCAGAATTAAAAATAAACCCAAATATTAAATCATTAGAA 2526
Query 53528 GACTTGGAGACTTGGGTAACACTGGACGACTTTGATGTCTTTGGCTACAAACACCATGAT 53587
||| | || | ||||| ||| || || ||||| || | || || | || |||
Sbjct 2527 GACATTGAAAGCTGGGTTACAAAAGATGATTTTGAAGTAGTAGGTTATCAGTGTCACGAT 2586
Query 53588 CCAATAAAATATCCATTCACTGTTTA 53613
|||| || ||||| || | |||||
Sbjct 2587 GCAATTAAGTATCCGTTTTCAGTTTA 2612
>seq5
Length=869209
Score = 129 bits (142), Expect = 3e-25
Identities = 345/525 (66%), Gaps = 2/525 (0%)
Strand=Plus/Plus
Query 52925 AAAGCAGCTGTAGCCGAACTGCTTGGGTACATTCGTGGATACAGCAGTGCCGAAGATTTC 52984
|||||||| | || ||| || | || ||| | | || || |||||||| | | |||
Sbjct 100031 AAAGCAGCGATTGCTGAATTGTTAGGATACTTAAGGGGTTATGACAGTGCCGCACAATTC 100090
Query 52985 CGAAAGCTGGGAACCACCACTTGGGACGCTAACGCCAACAAGAATGAAGCTTGGCTTAAT 53044
|| | || | || ||| | || || |||||| | ||| | || ||| | ||
Sbjct 100091 CGTGCTATCGGTTGTAATACCTGGAATGCGAATGCCAACGAAAATCAGGCCTGGTTAGAT 100150
Query 53045 AACCCGTACCGCGTGGGCAATGACCACATGGGGCGTGTTTACGGTGTGCAGGGACGATCT 53104
|||||| | || ||| | || | ||||| || || || |||||||| || || |
Sbjct 100151 AACCCGCATCGTAAGGGTGAAGATGATATGGGCCGGGTATATGGTGTGCAAGGCCGGCGT 100210
Query 53105 TGGGCTAAGCCGGATGGCGGTACTGTGGACCAGCTCAAGAAGATTGTGGATAATCTTACT 53164
||| ||||| |||||| ||| | || || || || || || || || |
Sbjct 100211 TGGCAGAAGCCCGATGGCTCAACTTTAGATCAACTGGCAAAAATCGTCAGCAACCTGAGC 100270
Query 53165 AACGGTATCGACGACCGTGGGGAGATCCTGAACTTCTACAACCCGGGCGAGTTCCACATG 53224
|| || |||||||| |||| |||||||||| ||| || ||||| || ||||| | |
Sbjct 100271 AAGGGGATCGACGATCGTGCCGAGATCCTGACCTTTTATAACCCTGGTGAGTTTGAACTT 100330
Query 53225 GGATGCCTACGCCCGTGCATGTACAGCCACCACTTCTCACTGCTAGGAGACACCCTGTAT 53284
|| || || || || || ||| | | ||| ||| | || ||||| | ||||||
Sbjct 100331 GGTTGTCTGCGGCCCTGTATGCATACCCATACCTTTAGTTTACTGGGAGATAAGCTGTAT 100390
Query 53285 CTCAACAGCACA-CAACGCTCTTGTGATGTACCTTTGGGTCTGAACTTCAACATGGTTCA 53343
|| | | | | ||||| ||||||||||| |||| ||||| || || ||| ||
Sbjct 100391 CTGA-CGTCTTATCAACGTAGCTGTGATGTACCGCTGGGACTGAATTTTAATCAGGTACA 100449
Query 53344 GGTGTACGTGTTCCTAGCGATCATGGCTCAAATCACCGGGCACAAGATGGGCACCGCGCA 53403
| |||||| || || | ||||| ||||||||||| ||||| ||| | || |
Sbjct 100450 ATGTTTCGTGTTACTGGCACTTATGGCGCAAATCACCGGCCACAAAGCGGGTAAGGCCTA 100509
Query 53404 CCACAAGATCGTGAACGCTCATATCTACGAAGACCAGATAGATCT 53448
||| || || | || ||||| | |||||| | ||| | || ||
Sbjct 100510 CCATAAAATTGCCAATGCTCACGTTTACGAAAATCAGCTGGAGCT 100554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 251325117294752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |