Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019726.1 Length=141836 Score E Sequences producing significant alignments: (Bits) Value seq57423 82.4 7e-11 >seq57423 Length=6334 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/297 (67%), Gaps = 11/297 (4%) Strand=Plus/Plus Query 93721 GTTGCTTTGATTGCAAACCCGTGAGTATCACGAGTATTAAATTG--GTAAGAGAAACTAC 93778 || ||||| | ||||| || || |||||||| ||||| | ||| | | |||| Sbjct 5478 GTGGCTTTTACGGCAAAACCAAAGGTGTCACGAGT--TAAATAGTTGTAGGTATAGCTAC 5535 Query 93779 CTACACCTAATACAACATTAATACTTGCAAAACCTTTTTCTTTTAATCCTTCACAAATTT 93838 | | ||| || || | |||| | ||||| ||||| ||| || |||| | || | Sbjct 5536 CGATACCAAAGACTAGATTATTCGAAGCAAAGCCTTTGGCTTCCAAGCCTTTTAAGATAT 5595 Query 93839 GTTGAGCACGTTCATAGT-TAATAGAGTCTCCATAAATTAATCCTACGTGTTCATCTAAT 93897 ||| |||||||| ||| |||| ||||| ||||| ||||| || || | || | | | Sbjct 5596 TTTGCGCACGTTC-TAGAGTAATCGAGTCACCATAGATTAAACCAACACGCTCGTTGAGT 5654 Query 93898 ACTTTGTACCCTTTTTCAGTTTCAGTACCTCCAAATGTATCCCAAAGTACTTCTACTGCA 93957 ||||| || |||| ||||| || || ||||| | ||||| | || |||||| Sbjct 5655 ACTTTATAGCCTTGAGTTGTTTCCGTGCCGCCAAAAATTTCCCATAAACATTGCACTGCA 5714 Query 93958 CCTTTA----CGTTCATAATCAGTATCTGCATCAGGGTCTCCGCAAATAATTTTAAC 94010 |||||| || | ||| ||||||||||| || || || |||||||| || Sbjct 5715 CCTTTATAAGCGGGGCT-ATCTAGCTCTGCATCAGGATCACCACAGATAATTTTCAC 5770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452724930245760