Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq5 132 5e-26 >seq5 Length=869209 Score = 132 bits (146), Expect = 5e-26 Identities = 287/427 (67%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 73413 CTTCCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTC 73472 || || || || |||||| | || || ||||| || |||||||||||||| ||||| || Sbjct 710762 CTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTA 710821 Query 73473 CTGATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGAC 73532 ||||| | |||||||| |||||| || ||||| || || ||| |||| || | Sbjct 710822 CTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCATTGTAAAA 710881 Query 73533 TATGTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGT 73592 || ||||| | ||||||||||| || | ||| || ||| || | | || || Sbjct 710882 TACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTAGGTAGC 710941 Query 73593 CCTATTCGCGGCGGAGAGATGGTTCACACAGGCCTGATCCCATTCATCAAGTATCTCACT 73652 || || || || || |||| || ||| ||||| || ||| || || Sbjct 710942 CCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGCATTTCCAG 711001 Query 73653 GGGGCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACATC 73712 || | || ||||| || ||||| | ||||||||||| || || || | | Sbjct 711002 ACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTGTTCTAC 711061 Query 73713 CCTCTGTGGCAT-TACCAGTTCGATGACGTCGTTGTACTGAAGAATAACCGTGGTACTGA 73771 || |||||||| | ||| || | | | |||||||| |||||||| ||| || Sbjct 711062 CCCTTGTGGCATCTGGAAGTGGAATCGC-TGCTGGTACTGAAAAATAACCGCGGTGTAGA 711120 Query 73772 AGAGAACCGCGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTGATGTTTGAGCG 73831 ||||||||| | | | | | | |||||||| | ||| | |||||| |||||| | |||| Sbjct 711121 AGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTATCAGCG 711180 Query 73832 CCTGGTT 73838 |||| || Sbjct 711181 CCTGATT 711187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509518288727040